A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv517188



Internal ID15444481
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr5:97691782..97801352hg38UCSC Ensembl
Innerchr5:97027486..97137056hg19UCSC Ensembl
Innerchr5:97053242..97162812hg18UCSC Ensembl
Innerchr5:97053242..97162812hg17UCSC Ensembl
Cytoband5q15
Allele length
AssemblyAllele length
hg38109571
hg19109571
hg18109571
hg17109571
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv671790, nssv669814, nssv654062, nssv687231, nssv660444, nssv652145, nssv684925, nssv676021, nssv667111, nssv664476, nssv659672, nssv673115, nssv691210, nssv690649, nssv660416, nssv674705, nssv679248, nssv677581, nssv668022, nssv657598, nssv657922, nssv688689, nssv666680, nssv660154, nssv667035, nssv687803, nssv668646, nssv663449, nssv690706, nssv663342, nssv684085, nssv686986, nssv662416, nssv661992, nssv686299, nssv652945, nssv675477, nssv659827, nssv689685, nssv651682, nssv663976, nssv673320, nssv678357, nssv675992, nssv662566, nssv657212, nssv700585, nssv691271, nssv675380, nssv678251, nssv674149, nssv671030, nssv658845, nssv652879, nssv665346, nssv687249, nssv674938, nssv656847, nssv653965, nssv691600, nssv663431, nssv682334, nssv678153, nssv683827, nssv668621, nssv661811, nssv659001, nssv682557, nssv669041, nssv656062, nssv669891, nssv677823, nssv675820, nssv651994, nssv665674, nssv659759, nssv680327, nssv667185, nssv655193, nssv671353, nssv672576, nssv690783, nssv670765, nssv652082, nssv664513, nssv687077, nssv677797
Samples
Known Genes
MethodSNP array
AnalysisSample-level CNVs
PlatformGPL6434
Comments
ReferenceShaikh_et_al_2009
Pubmed ID19592680
Accession Number(s)nsv517188
Frequency
Sample Size2026
Observed Gain0
Observed Loss87
Observed Complex0
Frequencyn/a


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