A curated catalogue of human genomic structural variation

Variant Details

Variant: nsv517139

Internal ID

15097746

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
Inner	chr10:86672571..86682683	hg38	UCSC Ensembl
Inner	chr10:88432328..88442440	hg19	UCSC Ensembl
Inner	chr10:88422308..88432420	hg18	UCSC Ensembl
Inner	chr10:88422308..88432420	hg17	UCSC Ensembl

Cytoband

10q23.2

Allele length

Assembly	Allele length
hg38	10113
hg19	10113
hg18	10113
hg17	10113

Variant Type

CNV gain+loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

M

Merged Variants

Supporting Variants

nssv676074, nssv696891, nssv683272, nssv657129, nssv663275, nssv676791, nssv684610, nssv670339, nssv661738, nssv653972, nssv666621, nssv688902, nssv683221, nssv655661, nssv674894, nssv667117, nssv686177, nssv683234, nssv681636, nssv687514, nssv654462, nssv658590, nssv682873, nssv667461, nssv653017, nssv654859, nssv692702, nssv691802, nssv680623, nssv692369, nssv683611, nssv677784, nssv681991, nssv669491, nssv692419, nssv691865, nssv653899, nssv680550, nssv692142, nssv673199, nssv670433, nssv688631, nssv693129, nssv675362, nssv663720, nssv661397, nssv693395, nssv689567, nssv663937, nssv683256, nssv682739, nssv678089, nssv656429, nssv667592, nssv675344, nssv673556, nssv688041, nssv662744, nssv678449, nssv680532, nssv667338, nssv665078, nssv691415, nssv680811, nssv663207, nssv677145, nssv681458, nssv665661, nssv651768, nssv666470, nssv679940, nssv688517, nssv668469, nssv673020, nssv684880, nssv674383, nssv656320, nssv679164, nssv651903, nssv671636, nssv661135, nssv665575, nssv683734, nssv666641, nssv659216, nssv663181, nssv660051, nssv691745, nssv657230, nssv659704, nssv655255, nssv699899, nssv677554, nssv672887, nssv657217, nssv662484, nssv662707, nssv659975, nssv681813, nssv693054, nssv662792, nssv656000, nssv653943, nssv664000, nssv674230, nssv685394, nssv665760, nssv661216, nssv684520, nssv657524, nssv669993, nssv660926, nssv688478, nssv669130, nssv658668, nssv680008, nssv692929, nssv689353, nssv687145, nssv680642, nssv669956, nssv660155, nssv653132, nssv663513, nssv654339, nssv678783, nssv674996, nssv667719, nssv688951, nssv665326, nssv671427, nssv656468, nssv651738, nssv684312, nssv663811, nssv688988, nssv652651, nssv667889, nssv690122, nssv675756, nssv678163, nssv660207, nssv693736, nssv666585, nssv658451, nssv668123, nssv667195, nssv652129, nssv686634, nssv672673, nssv669700, nssv672915, nssv654637, nssv687999, nssv654278, nssv665428, nssv663752, nssv685365, nssv670706, nssv668301, nssv670505, nssv657489, nssv662073, nssv653385, nssv680991, nssv674116, nssv664303, nssv655518, nssv675303, nssv665774, nssv660750, nssv664100, nssv666744, nssv681821, nssv679252, nssv659351, nssv659173, nssv679332, nssv661362, nssv656741, nssv672042, nssv657977, nssv658849, nssv655130, nssv676355, nssv690336, nssv690624, nssv686700, nssv662877, nssv655783, nssv681710, nssv668093, nssv658220, nssv682792, nssv689499, nssv662291, nssv681849, nssv687316, nssv680207, nssv666092, nssv657830, nssv691996, nssv692984, nssv673818, nssv673076, nssv670060, nssv675895, nssv679516, nssv675998, nssv667243, nssv676442, nssv673598, nssv663598, nssv691152, nssv686891, nssv658343, nssv658910, nssv652114, nssv653848, nssv663353

Samples

Known Genes

Method

SNP array

Analysis

Sample-level CNVs

Platform

GPL6434

Comments

Reference

Shaikh_et_al_2009

Pubmed ID

Accession Number(s)

Frequency

Sample Size	2026
Observed Gain	3
Observed Loss	217
Observed Complex	0
Frequency	n/a