A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv516973



Internal ID15097580
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr19:42698618..43362671hg38UCSC Ensembl
Innerchr19:43202770..43866823hg19UCSC Ensembl
Innerchr19:47894610..48558663hg18UCSC Ensembl
Innerchr19:47894610..48558663hg17UCSC Ensembl
Cytoband19q13.2
Allele length
AssemblyAllele length
hg38664054
hg19664054
hg18664054
hg17664054
Variant TypeCNV gain+loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv655906, nssv676324, nssv689731, nssv679997, nssv665360, nssv679588, nssv676988, nssv681119, nssv688703, nssv695103, nssv686136, nssv686397, nssv658914, nssv673618, nssv680394, nssv684802, nssv659577, nssv675110, nssv680512, nssv688337, nssv687813, nssv692610, nssv663302, nssv662964, nssv666625, nssv686447, nssv689265, nssv652216, nssv652396, nssv657239, nssv681393, nssv668206, nssv651743, nssv692207, nssv662763, nssv684024, nssv655282, nssv689337, nssv690851, nssv656652, nssv701750, nssv686928, nssv677092, nssv663242, nssv676379, nssv668451, nssv675987, nssv653027, nssv674458, nssv667123, nssv680911, nssv681716, nssv685441, nssv684572, nssv681281, nssv686355, nssv658283, nssv660196, nssv667174, nssv696061, nssv686088, nssv693102, nssv663889, nssv657917, nssv691695, nssv689507, nssv691939, nssv672376, nssv661745, nssv692468, nssv683281, nssv657718, nssv666457, nssv672225, nssv658170, nssv687193, nssv651730, nssv671150, nssv654498, nssv685926, nssv665778, nssv655993, nssv661942, nssv681626, nssv673871, nssv682436, nssv665728, nssv659035, nssv660076, nssv657184, nssv683859, nssv675467, nssv665996, nssv671321, nssv653171, nssv652174, nssv678866, nssv662323, nssv684619, nssv672590, nssv686929, nssv659746, nssv668205, nssv665065, nssv662683, nssv684051, nssv667444, nssv680266, nssv655402, nssv669886, nssv688576, nssv689264, nssv669773, nssv653257, nssv660409, nssv679427, nssv689671, nssv653780, nssv662491, nssv660561, nssv666874, nssv681193, nssv688485, nssv656634, nssv667770, nssv679337, nssv667844, nssv662643, nssv678620, nssv653000, nssv692849, nssv678711, nssv692672, nssv665519, nssv672213, nssv692147, nssv686262, nssv684315, nssv659610, nssv692079, nssv669431, nssv671544, nssv673826, nssv681120, nssv660785, nssv673183, nssv679198, nssv679381, nssv682175, nssv681253, nssv664284, nssv665269, nssv654589, nssv657045, nssv692731, nssv659632, nssv680240, nssv683781, nssv684356, nssv657886, nssv662927, nssv664708, nssv698971, nssv654038, nssv692873, nssv691670, nssv655504, nssv670837, nssv675637, nssv691308, nssv683647, nssv705054, nssv674492, nssv658576, nssv667897, nssv684645, nssv669686, nssv674589, nssv666495, nssv652838, nssv683893, nssv656458, nssv663441, nssv699170, nssv689870, nssv690072, nssv663361, nssv679921, nssv678346, nssv672419, nssv690345, nssv681305, nssv687262, nssv690042, nssv657773, nssv667466, nssv666193, nssv687974, nssv653538, nssv690604, nssv652469, nssv676485, nssv687960, nssv656334, nssv662601, nssv687243, nssv693285, nssv665748, nssv663397, nssv657763, nssv658621, nssv662201, nssv688767, nssv688159, nssv653337, nssv655881, nssv663262, nssv662469, nssv658577, nssv668921, nssv672624, nssv673399, nssv676532, nssv684401, nssv670753
Samples
Known GenesCD177, LOC100289650, LOC284344, PRG1, PSG1, PSG10P, PSG11, PSG2, PSG3, PSG4, PSG5, PSG6, PSG7, PSG8, PSG9
MethodSNP array
AnalysisSample-level CNVs
PlatformGPL6434
Comments
ReferenceShaikh_et_al_2009
Pubmed ID19592680
Accession Number(s)nsv516973
Frequency
Sample Size2026
Observed Gain28
Observed Loss197
Observed Complex0
Frequencyn/a


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