A curated catalogue of human genomic structural variation

Variant Details

Variant: nsv516929

Internal ID

15097536

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
Inner	chr5:15087682..15870191	hg38	UCSC Ensembl
Inner	chr5:15087791..15870300	hg19	UCSC Ensembl
Inner	chr5:15140791..15923300	hg18	UCSC Ensembl
Inner	chr5:15140791..15923300	hg17	UCSC Ensembl

Cytoband

5p15.1

Allele length

Assembly	Allele length
hg38	782510
hg19	782510
hg18	782510
hg17	782510

Variant Type

CNV gain+loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

M

Merged Variants

Supporting Variants

nssv690648, nssv676597, nssv687826, nssv679883, nssv671079, nssv668059, nssv681918, nssv679305, nssv690371, nssv688455, nssv678973, nssv652671, nssv700545, nssv676272, nssv655434, nssv662849, nssv653166, nssv691781, nssv660545, nssv661966, nssv686251, nssv682785, nssv682358, nssv659928, nssv670543, nssv659564, nssv687915, nssv693519, nssv678680, nssv675418, nssv662214, nssv703537, nssv690663, nssv683265, nssv673009, nssv663565, nssv663497, nssv670567, nssv693917, nssv668233, nssv651972, nssv652488, nssv660376, nssv667904, nssv674809, nssv679146, nssv674794, nssv693111, nssv671835, nssv667582, nssv685987, nssv675850, nssv663836, nssv662578, nssv661991, nssv690330, nssv674512, nssv690615, nssv676304, nssv658645, nssv684768, nssv682854, nssv652806, nssv674392, nssv689384, nssv691462, nssv670809, nssv666978, nssv692788, nssv678422, nssv687979, nssv660162, nssv658791, nssv682184, nssv674480, nssv680175, nssv661917, nssv661660, nssv691925, nssv653735, nssv666197, nssv692286, nssv688312, nssv664207, nssv660846, nssv682050, nssv677483, nssv657641, nssv655918, nssv665323, nssv698932, nssv684426, nssv665716, nssv684976, nssv676560, nssv662496, nssv689003, nssv655388, nssv684012, nssv683324, nssv665595, nssv676815, nssv688286, nssv681901, nssv679010, nssv675370, nssv676432, nssv674104, nssv672358, nssv687743, nssv680489, nssv666737, nssv661081, nssv678356, nssv670014, nssv664537, nssv652944, nssv681448, nssv695796, nssv681316, nssv670595, nssv691001, nssv662235, nssv655672, nssv680277, nssv660571, nssv657564, nssv660415, nssv676476, nssv680588, nssv670376, nssv666182, nssv668361, nssv675676, nssv671755, nssv658028, nssv662301, nssv657850, nssv652325, nssv660108, nssv681568, nssv686073, nssv664360, nssv692637, nssv692735, nssv651696, nssv692101, nssv653215, nssv651975, nssv653288, nssv670893, nssv664169, nssv678777, nssv691071, nssv658309, nssv690593, nssv687229, nssv686090, nssv662663, nssv690576, nssv678734, nssv691209, nssv675585, nssv687136, nssv653219, nssv671673, nssv678017, nssv652253, nssv690715, nssv675451, nssv660344, nssv693766, nssv655891, nssv691288, nssv685309, nssv698238, nssv660634, nssv687371, nssv673422, nssv683199, nssv657941, nssv668820, nssv665419, nssv660799, nssv671554, nssv671479, nssv670126, nssv684303, nssv658831, nssv658511, nssv663448, nssv677951, nssv662330, nssv666502, nssv682469, nssv668620, nssv662892, nssv656238, nssv652539, nssv680522, nssv655482, nssv657726, nssv655778, nssv673257, nssv657703, nssv690899, nssv654347, nssv672795, nssv668440, nssv691194, nssv659690, nssv686905, nssv671971, nssv692363, nssv655593, nssv688131

Samples

Known Genes

Method

SNP array

Analysis

Sample-level CNVs

Platform

GPL6434

Comments

Reference

Shaikh_et_al_2009

Pubmed ID

Accession Number(s)

Frequency

Sample Size	2026
Observed Gain	16
Observed Loss	200
Observed Complex	0
Frequency	n/a