A curated catalogue of human genomic structural variation

Variant Details

Variant: nsv516918

Internal ID

15444211

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
Inner	chr10:121009763..121030305	hg38	UCSC Ensembl
Inner	chr10:122769276..122789818	hg19	UCSC Ensembl
Inner	chr10:122759266..122779808	hg18	UCSC Ensembl
Inner	chr10:122759266..122779808	hg17	UCSC Ensembl

Cytoband

10q26.12

Allele length

Assembly	Allele length
hg38	20543
hg19	20543
hg18	20543
hg17	20543

Variant Type

CNV gain+loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

M

Merged Variants

Supporting Variants

nssv683207, nssv658926, nssv686197, nssv657488, nssv677502, nssv690733, nssv686923, nssv674967, nssv686307, nssv676976, nssv683138, nssv660819, nssv652614, nssv676405, nssv666938, nssv667911, nssv687434, nssv667972, nssv680929, nssv659260, nssv671622, nssv674432, nssv655299, nssv671666, nssv667556, nssv662352, nssv688514, nssv681522, nssv679419, nssv679791, nssv686827, nssv664910, nssv651737, nssv669168, nssv659700, nssv672726, nssv662554, nssv674551, nssv688253, nssv676071, nssv669668, nssv653204, nssv663461, nssv654032, nssv657363, nssv675014, nssv677014, nssv652756, nssv678042, nssv672412, nssv665792, nssv661667, nssv654561, nssv672064, nssv680622, nssv652547, nssv691862, nssv675329, nssv688985, nssv672885, nssv655748, nssv687860, nssv653182, nssv662184, nssv682280, nssv664228, nssv662457, nssv660298, nssv653641, nssv692793, nssv687167, nssv680571, nssv689282, nssv685706, nssv675141, nssv666428, nssv664844, nssv668936, nssv680388, nssv666918, nssv678182, nssv686594, nssv675621, nssv655143, nssv685346, nssv676312, nssv686630, nssv663436, nssv690147, nssv655396, nssv673578, nssv669861, nssv688166, nssv682413, nssv680851, nssv663569, nssv656691, nssv653591, nssv664301, nssv651766, nssv667114, nssv679394, nssv672258, nssv693955, nssv671539, nssv663981, nssv656536, nssv653476, nssv662007, nssv678860, nssv664135, nssv674016, nssv656383, nssv668166, nssv677119, nssv653527, nssv690434, nssv684559, nssv671461, nssv682393, nssv693657, nssv692983, nssv668802, nssv656580, nssv670037, nssv664154, nssv683374, nssv673774, nssv654307, nssv680335, nssv680903, nssv657268, nssv681604, nssv690908, nssv659291, nssv652649, nssv660534, nssv664329, nssv667240, nssv663510, nssv656272, nssv657780

Samples

Known Genes

Method

SNP array

Analysis

Sample-level CNVs

Platform

GPL6434

Comments

Reference

Shaikh_et_al_2009

Pubmed ID

Accession Number(s)

Frequency

Sample Size	2026
Observed Gain	2
Observed Loss	140
Observed Complex	0
Frequency	n/a