A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv516886



Internal ID15097493
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr17:1708905..1754359hg38UCSC Ensembl
Innerchr17:1612199..1657653hg19UCSC Ensembl
Innerchr17:1558949..1604403hg18UCSC Ensembl
Innerchr17:1558949..1604403hg17UCSC Ensembl
Cytoband17p13.3
Allele length
AssemblyAllele length
hg3845455
hg1945455
hg1845455
hg1745455
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv692260, nssv679402, nssv682227, nssv672239, nssv654693
Samples
Known GenesMIR22, MIR22HG, SERPINF2, TLCD2, WDR81
MethodSNP array
AnalysisSample-level CNVs
PlatformGPL6434
Comments
ReferenceShaikh_et_al_2009
Pubmed ID19592680
Accession Number(s)nsv516886
Frequency
Sample Size2026
Observed Gain0
Observed Loss5
Observed Complex0
Frequencyn/a


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