A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv516766



Internal ID15097373
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr1:27335744..27405147hg38UCSC Ensembl
Innerchr1:27662235..27731651hg19UCSC Ensembl
Innerchr1:27534822..27604238hg18UCSC Ensembl
Innerchr1:27346377..27415793hg17UCSC Ensembl
Cytoband1p36.11
Allele length
AssemblyAllele length
hg3869404
hg1969417
hg1869417
hg1769417
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv670705, nssv654983
Samples
Known GenesCD164L2, FCN3, GPR3, MAP3K6, SYTL1, TMEM222, WASF2
MethodSNP array
AnalysisSample-level CNVs
PlatformGPL6434
Comments
ReferenceShaikh_et_al_2009
Pubmed ID19592680
Accession Number(s)nsv516766
Frequency
Sample Size2026
Observed Gain0
Observed Loss2
Observed Complex0
Frequencyn/a


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