A curated catalogue of human genomic structural variation

Variant Details

Variant: nsv516641

Internal ID

15443934

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
Inner	chr3:65194244..65226921	hg38	UCSC Ensembl
Inner	chr3:65179919..65212596	hg19	UCSC Ensembl
Inner	chr3:65154959..65187636	hg18	UCSC Ensembl
Inner	chr3:65154959..65187636	hg17	UCSC Ensembl

Cytoband

3p14.1

Allele length

Assembly	Allele length
hg38	32678
hg19	32678
hg18	32678
hg17	32678

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

M

Merged Variants

Supporting Variants

nssv683214, nssv680215, nssv661845, nssv656449, nssv658842, nssv688747, nssv686006, nssv678970, nssv675297, nssv660020, nssv669361, nssv680918, nssv660413, nssv692692, nssv689629, nssv682757, nssv680598, nssv652982, nssv684184, nssv676718, nssv681700, nssv661934, nssv677133, nssv684603, nssv684492, nssv653261, nssv677700, nssv678372, nssv677645, nssv687074, nssv675201, nssv666721, nssv678226, nssv653437, nssv680802, nssv661544, nssv656951, nssv662513, nssv665101, nssv684198, nssv663784, nssv682933, nssv669778, nssv661570, nssv691679, nssv682829, nssv686265, nssv689150, nssv686404, nssv661475, nssv678174, nssv654849, nssv684081, nssv669221, nssv690572, nssv674732, nssv678351, nssv669409, nssv668412, nssv659177, nssv682154, nssv662717, nssv654544, nssv680296, nssv661448, nssv692676, nssv684912, nssv659922, nssv689901, nssv658110, nssv688963, nssv674205, nssv678033, nssv668640, nssv667604, nssv687800, nssv685017, nssv654631, nssv664204, nssv690514, nssv682770, nssv656031, nssv658190, nssv682137, nssv682467, nssv687778, nssv654781, nssv682563, nssv683172, nssv669563, nssv656218, nssv691778, nssv684479, nssv671131, nssv683484, nssv675317, nssv655529, nssv663737, nssv673657, nssv657539, nssv653547, nssv670857, nssv683751, nssv681005, nssv655816, nssv679955, nssv654430, nssv667883, nssv662412, nssv660597, nssv690291, nssv682946, nssv680978, nssv680114, nssv681470, nssv675746, nssv654102, nssv666678, nssv655911, nssv670454, nssv669607, nssv690704, nssv693038, nssv684105, nssv654763, nssv682028, nssv671753, nssv655994, nssv673242, nssv676783, nssv673487, nssv692902, nssv687220, nssv683346, nssv675215, nssv691207, nssv653191, nssv652538, nssv667628, nssv663427, nssv697328, nssv689246, nssv685147, nssv673854, nssv683054, nssv677480, nssv654864, nssv657955, nssv651849, nssv678126, nssv660475, nssv689101, nssv656479, nssv667431, nssv692410, nssv667031, nssv666765, nssv672031, nssv662632, nssv693609, nssv657384, nssv657006, nssv652255, nssv669808, nssv653275, nssv678557, nssv652076

Samples

Known Genes

Method

SNP array

Analysis

Sample-level CNVs

Platform

GPL6434

Comments

Reference

Shaikh_et_al_2009

Pubmed ID

Accession Number(s)

Frequency

Sample Size	2026
Observed Gain	0
Observed Loss	167
Observed Complex	0
Frequency	n/a