A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv516578



Internal ID15097185
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:34515238..34593808hg38UCSC Ensembl
Innerchr6:34483015..34561585hg19UCSC Ensembl
Innerchr6:34590993..34669563hg18UCSC Ensembl
Innerchr6:34590993..34669563hg17UCSC Ensembl
Cytoband6p21.31
Allele length
AssemblyAllele length
hg3878571
hg1978571
hg1878571
hg1778571
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv662089, nssv700401, nssv669286, nssv676764
Samples
Known GenesC6orf106, PACSIN1, SPDEF
MethodSNP array
AnalysisSample-level CNVs
PlatformGPL6434
Comments
ReferenceShaikh_et_al_2009
Pubmed ID19592680
Accession Number(s)nsv516578
Frequency
Sample Size2026
Observed Gain0
Observed Loss4
Observed Complex0
Frequencyn/a


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