A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv516540



Internal ID15443833
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr19:35169547..35194633hg38UCSC Ensembl
Innerchr19:35660450..35685536hg19UCSC Ensembl
Innerchr19:40352290..40377376hg18UCSC Ensembl
Innerchr19:40352290..40377376hg17UCSC Ensembl
Cytoband19q13.12
Allele length
AssemblyAllele length
hg3825087
hg1925087
hg1825087
hg1725087
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv684675, nssv670880, nssv653075, nssv675466, nssv681038, nssv659369, nssv676261, nssv681872, nssv689954, nssv655280, nssv670285, nssv670002, nssv662250, nssv688048, nssv671747, nssv653745, nssv659561, nssv674790, nssv691725, nssv676008, nssv683261, nssv680796, nssv683923, nssv662575, nssv659088, nssv673375, nssv692580, nssv659660, nssv684256, nssv693258, nssv654157, nssv662228, nssv677790, nssv653116, nssv657163, nssv652068, nssv693101, nssv676518, nssv680450, nssv652095, nssv667708, nssv693311, nssv675504, nssv671777, nssv681907, nssv690832, nssv676378, nssv661805, nssv653978, nssv688503, nssv663412, nssv693531, nssv660229, nssv681693, nssv670314, nssv662343, nssv657740, nssv689606, nssv661759, nssv652467, nssv687986, nssv684117, nssv681252, nssv692295, nssv671659, nssv686446, nssv672864, nssv682958, nssv666590, nssv678942, nssv652344, nssv660672, nssv688932, nssv683380, nssv667088, nssv678533, nssv674930, nssv656611, nssv672442, nssv665926, nssv690889, nssv673279, nssv671174, nssv663730, nssv652215, nssv675407, nssv653522, nssv689069, nssv671892, nssv654521, nssv675871, nssv682844, nssv657109, nssv665727, nssv687849, nssv652555, nssv662815, nssv677674, nssv673924, nssv692467, nssv655133, nssv691938, nssv677962, nssv671826, nssv662835, nssv676584, nssv681304, nssv674147, nssv667843, nssv662623
Samples
Known GenesFXYD5
MethodSNP array
AnalysisSample-level CNVs
PlatformGPL6434
Comments
ReferenceShaikh_et_al_2009
Pubmed ID19592680
Accession Number(s)nsv516540
Frequency
Sample Size2026
Observed Gain0
Observed Loss116
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer