A curated catalogue of human genomic structural variation

Variant Details

Variant: nsv516440

Internal ID

15443733

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
Inner	chr3:191343425..191355917	hg38	UCSC Ensembl
Inner	chr3:191061214..191073706	hg19	UCSC Ensembl
Inner	chr3:192543908..192556400	hg18	UCSC Ensembl
Inner	chr3:192543916..192556408	hg17	UCSC Ensembl

Cytoband

3q28

Allele length

Assembly	Allele length
hg38	12493
hg19	12493
hg18	12493
hg17	12493

Variant Type

CNV gain+loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

M

Merged Variants

Supporting Variants

nssv675582, nssv674818, nssv663325, nssv690511, nssv653958, nssv691572, nssv674836, nssv673571, nssv693244, nssv670011, nssv688109, nssv687989, nssv676811, nssv683750, nssv675875, nssv654260, nssv665044, nssv653488, nssv674280, nssv681941, nssv669137, nssv693995, nssv664370, nssv655611, nssv654244, nssv652965, nssv691082, nssv662631, nssv666300, nssv665100, nssv685146, nssv664674, nssv678575, nssv674722, nssv656216, nssv675348, nssv681601, nssv688687, nssv673656, nssv690346, nssv652920, nssv672829, nssv655972, nssv654118, nssv685993, nssv688842, nssv680048, nssv687766, nssv682086, nssv679763, nssv679783, nssv691701, nssv666630, nssv656404, nssv675063, nssv683808, nssv655310, nssv683005, nssv655774, nssv663783, nssv653750, nssv683563, nssv682782, nssv679202, nssv660939, nssv675772, nssv668411, nssv657639, nssv678516, nssv672288, nssv688369, nssv668436, nssv693151, nssv670822, nssv654762, nssv679235, nssv684264, nssv675448, nssv684167, nssv661783, nssv662564, nssv658259, nssv667660, nssv664474, nssv657938, nssv664530, nssv683027, nssv659506, nssv693985, nssv673112, nssv684133, nssv668792, nssv681360, nssv675607, nssv652202, nssv652537, nssv683726, nssv673485, nssv677949, nssv684080, nssv686360, nssv683784, nssv692554, nssv661496, nssv660654, nssv680019, nssv677266, nssv666370, nssv689463, nssv656438, nssv678733, nssv671920, nssv661125, nssv658476, nssv688309, nssv666653, nssv683544, nssv687966, nssv692597, nssv684104, nssv672571, nssv658640, nssv692786, nssv653622, nssv687054, nssv671209, nssv678100, nssv672473, nssv659806, nssv653098, nssv658996, nssv657399, nssv674001, nssv653084, nssv658580, nssv684183, nssv674388, nssv686295, nssv674056, nssv679595, nssv667602, nssv679053, nssv692654, nssv686036, nssv685604, nssv666720, nssv653683, nssv665151, nssv671661, nssv688191, nssv687671, nssv692006, nssv686403, nssv692331, nssv686683, nssv662539, nssv690740, nssv678173, nssv688162, nssv661610, nssv693263, nssv680246, nssv680231, nssv687430, nssv663426, nssv656099, nssv674203, nssv662471, nssv679544, nssv677986, nssv658660, nssv675337, nssv669889, nssv659019, nssv689679, nssv672681, nssv680518, nssv674954, nssv662700, nssv659920, nssv688384, nssv656732, nssv652368, nssv677964, nssv670940, nssv675642, nssv686264, nssv691119, nssv692065, nssv677197, nssv666422, nssv680618, nssv661766, nssv683438, nssv682064, nssv673950, nssv651848, nssv664579, nssv663927, nssv653143, nssv691048, nssv684211, nssv658023, nssv676238, nssv692406, nssv671237, nssv652312, nssv675127, nssv660132, nssv690590, nssv678379, nssv670658, nssv670562, nssv663654, nssv679154, nssv659053, nssv682048, nssv672510, nssv669535, nssv688746, nssv680154, nssv680128, nssv681581, nssv656125, nssv660185, nssv673684, nssv661809, nssv681914, nssv680435, nssv673068, nssv654630, nssv687754, nssv686603, nssv688453, nssv686206, nssv670272, nssv679005, nssv669280, nssv683998, nssv681928, nssv672772, nssv674542, nssv687072, nssv678032, nssv704296, nssv663950, nssv667126, nssv658951, nssv685123, nssv679679, nssv661569, nssv687116, nssv687032, nssv662659, nssv687799, nssv675414, nssv676533, nssv689556, nssv655717, nssv653452, nssv675705, nssv658303, nssv655562, nssv665932, nssv663028, nssv691163, nssv693576, nssv658857, nssv671589, nssv665454, nssv668276, nssv673451, nssv681063, nssv678949, nssv662862, nssv652562, nssv655476, nssv676015, nssv658805, nssv656463, nssv660977, nssv652119, nssv670366, nssv688011, nssv661447, nssv658529, nssv665292, nssv674610, nssv664184, nssv672056, nssv660199, nssv686468, nssv693140, nssv671750, nssv670758, nssv693607, nssv663562, nssv678760, nssv682828, nssv667625, nssv657668, nssv689362, nssv677598, nssv684011, nssv668211, nssv672114, nssv667030, nssv669038, nssv687822, nssv681838, nssv691507, nssv686026, nssv673056, nssv656075, nssv683931, nssv671431, nssv658624, nssv672950, nssv660789, nssv668833, nssv671498, nssv693534, nssv678329, nssv658287, nssv668107, nssv686109, nssv664359, nssv666179, nssv673129, nssv691776, nssv684491, nssv693339, nssv664509, nssv685647, nssv692453, nssv675527, nssv659305, nssv671107, nssv667641, nssv676696, nssv670453, nssv687350, nssv655217, nssv681806, nssv679924, nssv663378, nssv666829, nssv658743, nssv653373, nssv689873, nssv675547, nssv657503, nssv682733, nssv679088, nssv671324, nssv652022, nssv660412, nssv653666, nssv687941, nssv681224, nssv686424, nssv653705, nssv690998, nssv686663, nssv676522, nssv655429, nssv680214, nssv667799, nssv689860, nssv678350, nssv693473, nssv659902, nssv689941, nssv655668, nssv671572, nssv660491, nssv679902, nssv659967, nssv680351, nssv665712, nssv668926, nssv662054, nssv659667, nssv682298, nssv655408, nssv656477, nssv690703, nssv670029, nssv662737, nssv684320, nssv656167, nssv672709, nssv679174, nssv673167, nssv660161, nssv692901, nssv691253, nssv688618, nssv681310, nssv679128, nssv653163, nssv665781, nssv652073, nssv691029, nssv676911, nssv689811, nssv685584, nssv668017, nssv663488, nssv668977, nssv654360, nssv687011, nssv676796, nssv688527, nssv689183, nssv691067, nssv673224, nssv681742, nssv684120, nssv670287, nssv691426, nssv678225, nssv686918, nssv663860, nssv657595, nssv689981, nssv673639, nssv660400, nssv668760, nssv653312, nssv676388, nssv679626, nssv693723, nssv667384, nssv678479, nssv659037, nssv655528, nssv662716, nssv694020, nssv690896, nssv666287, nssv655267, nssv660309, nssv687382, nssv661657, nssv651732, nssv665068, nssv659276, nssv682153, nssv689001, nssv681487, nssv654812, nssv679302, nssv671830, nssv692612, nssv651715, nssv680471, nssv675836, nssv660035, nssv682628, nssv664711, nssv662233, nssv697757, nssv685540, nssv654450, nssv662206, nssv682419, nssv668638, nssv675200, nssv666324, nssv659596, nssv687368, nssv677793, nssv677066, nssv666022, nssv666762, nssv677171, nssv659132, nssv657889, nssv666263, nssv684974, nssv675231, nssv678076, nssv656860, nssv663628, nssv675073, nssv687913, nssv678813, nssv666595, nssv678371, nssv658504, nssv684510, nssv679981, nssv682848, nssv675378, nssv674127, nssv659382, nssv660997, nssv690870, nssv677218, nssv689098, nssv659226, nssv657745, nssv655791, nssv652902, nssv668335, nssv654136, nssv678699, nssv661190, nssv677698, nssv691834, nssv691587, nssv653436, nssv673145, nssv686071, nssv662432, nssv678245, nssv668992, nssv692521, nssv670738, nssv661474, nssv658753, nssv684869, nssv682381, nssv655887, nssv659635, nssv652695, nssv677246, nssv663363, nssv655453, nssv676448, nssv678400, nssv659876, nssv691946, nssv659782, nssv687871, nssv664111

Samples

Known Genes

Method

SNP array

Analysis

Sample-level CNVs

Platform

GPL6434

Comments

Reference

Shaikh_et_al_2009

Pubmed ID

Accession Number(s)

Frequency

Sample Size	2026
Observed Gain	10
Observed Loss	527
Observed Complex	0
Frequency	n/a