A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv516409



Internal ID15097016
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr1:227847430..228109044hg38UCSC Ensembl
Innerchr1:228035131..228296745hg19UCSC Ensembl
Innerchr1:226101754..226363368hg18UCSC Ensembl
Innerchr1:224341866..224603480hg17UCSC Ensembl
Cytoband1q42.13
Allele length
AssemblyAllele length
hg38261615
hg19261615
hg18261615
hg17261615
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv669590, nssv677714, nssv695015, nssv688018, nssv668165, nssv654535, nssv684814
Samples
Known GenesARF1, C1orf35, MIR3620, MIR5008, MRPL55, WNT3A, WNT9A
MethodSNP array
AnalysisSample-level CNVs
PlatformGPL6434
Comments
ReferenceShaikh_et_al_2009
Pubmed ID19592680
Accession Number(s)nsv516409
Frequency
Sample Size2026
Observed Gain0
Observed Loss7
Observed Complex0
Frequencyn/a


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