A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv516407



Internal ID15097014
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr21:45410958..45620742hg38UCSC Ensembl
Innerchr21:46830873..47040656hg19UCSC Ensembl
Innerchr21:45655301..45865084hg18UCSC Ensembl
Innerchr21:45655301..45865084hg17UCSC Ensembl
Cytoband21q22.3
Allele length
AssemblyAllele length
hg38209785
hg19209784
hg18209784
hg17209784
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv652887, nssv676871, nssv660455, nssv683690, nssv695809, nssv678911, nssv672768, nssv670071, nssv690481, nssv669603
Samples
Known GenesCOL18A1, COL18A1-AS1, MIR6815, SLC19A1
MethodSNP array
AnalysisSample-level CNVs
PlatformGPL6434
Comments
ReferenceShaikh_et_al_2009
Pubmed ID19592680
Accession Number(s)nsv516407
Frequency
Sample Size2026
Observed Gain0
Observed Loss10
Observed Complex0
Frequencyn/a


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