A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv515731



Internal ID15096338
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr19:58320453..58576112hg38UCSC Ensembl
Innerchr19:58831819..59087479hg19UCSC Ensembl
Innerchr19:63523631..63779291hg18UCSC Ensembl
Innerchr19:63523631..63779291hg17UCSC Ensembl
Cytoband19q13.43
Allele length
AssemblyAllele length
hg38255660
hg19255661
hg18255661
hg17255661
Variant TypeCNV gain+loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv679778, nssv670715, nssv673995, nssv684829, nssv673563, nssv684359, nssv701043, nssv697402, nssv677947, nssv674681, nssv679620, nssv662644, nssv665586, nssv703816, nssv691832, nssv695240, nssv665207, nssv655363, nssv676687, nssv665392, nssv693569, nssv664611, nssv674776, nssv692969, nssv689458
Samples
Known GenesA1BG, A1BG-AS1, CENPBD1P1, CHMP2A, LOC100131691, LOC646862, MIR4754, MIR6806, MIR6807, MZF1, RPS5, SLC27A5, TRIM28, UBE2M, ZBTB45, ZNF132, ZNF324, ZNF324B, ZNF446, ZNF497, ZNF584, ZNF837, ZSCAN22
MethodSNP array
AnalysisSample-level CNVs
PlatformGPL6434
Comments
ReferenceShaikh_et_al_2009
Pubmed ID19592680
Accession Number(s)nsv515731
Frequency
Sample Size2026
Observed Gain1
Observed Loss24
Observed Complex0
Frequencyn/a


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