A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv515639



Internal ID15443250
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr20:5303734..5318022hg38UCSC Ensembl
Innerchr20:5284380..5298668hg19UCSC Ensembl
Innerchr20:5232380..5246668hg18UCSC Ensembl
Innerchr20:5232380..5246668hg17UCSC Ensembl
Cytoband20p12.3
Allele length
AssemblyAllele length
hg3814289
hg1914289
hg1814289
hg1714289
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv684366, nssv698796, nssv679234, nssv683169, nssv673714, nssv673346, nssv662561, nssv679901, nssv679624, nssv682234, nssv688664, nssv667291, nssv692896, nssv656895, nssv688471, nssv674686, nssv672597, nssv674753, nssv686767, nssv664202, nssv654702, nssv658978
Samples
Known GenesPROKR2
MethodSNP array
AnalysisSample-level CNVs
PlatformGPL6434
Comments
ReferenceShaikh_et_al_2009
Pubmed ID19592680
Accession Number(s)nsv515639
Frequency
Sample Size2026
Observed Gain0
Observed Loss22
Observed Complex0
Frequencyn/a


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