A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv515219



Internal ID15813576
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
InnerchrX:88638399..88896599hg38UCSC Ensembl
InnerchrX:87893400..88151600hg19UCSC Ensembl
InnerchrX:87780056..88038256hg18UCSC Ensembl
CytobandXq21.31
Allele length
AssemblyAllele length
hg38258201
hg19258201
hg18258201
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv2993810, nssv2993657, nssv2993688, nssv2993779, nssv2993818, nssv2993701, nssv2993828, nssv2993829, nssv2993678, nssv2993854, nssv2993751, nssv2993831, nssv2993650, nssv2993755, nssv2993705, nssv2993813, nssv2993834, nssv2993835, nssv2993742, nssv2993614, nssv2993617, nssv2993797, nssv2993630, nssv2993656, nssv2993805, nssv2993759, nssv2993816, nssv2993621, nssv2993729, nssv2993840, nssv2993791, nssv2993857, nssv2993730, nssv2993697, nssv2993620, nssv2993704, nssv2993733, nssv2993734, nssv2993674, nssv2993763, nssv2993613, nssv2993795, nssv2993680, nssv2993781, nssv2993815, nssv2993641, nssv2993698, nssv2993747, nssv2993633, nssv2993762, nssv2993807, nssv2993766, nssv2993760, nssv2993785, nssv2993652, nssv2993610, nssv2993706, nssv2993856, nssv2993827, nssv2993711, nssv2993636, nssv2993658, nssv2993628, nssv2993848, nssv2993768, nssv2993668, nssv2993743, nssv2993676, nssv2993672, nssv2993640, nssv2993778, nssv2993761, nssv2993715, nssv2993714, nssv2993812, nssv2993707, nssv2993794, nssv2993787, nssv2993825, nssv2993792, nssv2993839, nssv2993670, nssv2993841, nssv2993784, nssv2993757, nssv2993692, nssv2993772, nssv2993669, nssv2993758, nssv2993790, nssv2993699, nssv2993738, nssv2993842, nssv2993713, nssv2993721, nssv2993693, nssv2993653, nssv2993806, nssv2993681, nssv2993687, nssv2993646, nssv2993659, nssv2993858, nssv2993744, nssv2993724, nssv2993639, nssv2993611, nssv2993618, nssv2993820, nssv2993690, nssv2993838, nssv2993726, nssv2993809, nssv2993709, nssv2993859, nssv2993683, nssv2993769, nssv2993849, nssv2993851, nssv2993775, nssv2993649, nssv2993843, nssv2993638, nssv2993725, nssv2993796, nssv2993786, nssv2993802, nssv2993731, nssv2993685, nssv2993623, nssv2993824, nssv2993662, nssv2993625, nssv2993783, nssv2993720, nssv2993860, nssv2993631, nssv2993736, nssv2993741, nssv2993647, nssv2993718, nssv2993836, nssv2993774, nssv2993619, nssv2993811, nssv2993750, nssv2993819, nssv2993689, nssv2993686, nssv2993728, nssv2993833, nssv2993780, nssv2993703, nssv2993765, nssv2993782, nssv2993654, nssv2993622, nssv2993660, nssv2993749, nssv2993655, nssv2993826, nssv2993788, nssv2993861, nssv2993821, nssv2993739, nssv2993616, nssv2993853, nssv2993830, nssv2993732, nssv2993671, nssv2993770, nssv2993710, nssv2993626, nssv2993803, nssv2993767, nssv2993814, nssv2993643, nssv2993822, nssv2993666, nssv2993719, nssv2993634, nssv2993684, nssv2993855, nssv2993651, nssv2993746, nssv2993817, nssv2993793, nssv2993727, nssv2993635, nssv2993612, nssv2993808, nssv2993801, nssv2993691, nssv2993846, nssv2993665, nssv2993850, nssv2993798, nssv2993845, nssv2993664, nssv2993663, nssv2993661, nssv2993700, nssv2993648, nssv2993832, nssv2993723, nssv2993722, nssv2993677, nssv2993717, nssv2993756, nssv2993667, nssv2993776, nssv2993740, nssv2993748, nssv2993673, nssv2993844, nssv2993804, nssv2993764, nssv2993752, nssv2993771, nssv2993745, nssv2993708, nssv2993695, nssv2993712, nssv2993644, nssv2993735, nssv2993632, nssv2993823, nssv2993627, nssv2993629, nssv2993624, nssv2993637, nssv2993716, nssv2993777, nssv2993800, nssv2993789, nssv2993675, nssv2993754, nssv2993799, nssv2993642, nssv2993773, nssv2993753, nssv2993645, nssv2993837, nssv2993702, nssv2993694, nssv2993852, nssv2993737, nssv2993615, nssv2993682, nssv2993696, nssv2993847, nssv2993679
SamplesNA19258, NA21317, NA12842, NA21488, NA21423, NA18621, NA12286, NA18862, NA10851, NA18524, NA18935, NA12344, NA18925, NA12801, NA18504, NA12340, NA12146, NA18959, NA21475, NA21301, NA18633, NA21522, NA18510, NA12750, NA12399, NA19107, NA18563, NA19192, NA19171, NA18940, NA18519, NA10835, NA10846, NA21359, NA18995, NA19191, NA18923, NA18558, NA18960, NA07048, NA07347, NA21381, NA19130, NA11930, NA19123, NA18868, NA11994, NA19207, NA19128, NA18966, NA18990, NA21523, NA19239, NA21387, NA21344, NA12777, NA21307, NA18605, NA21313, NA12760, NA12752, NA19120, NA07022, NA19194, NA19175, NA19161, NA12485, NA19184, NA18485, NA12877, NA18871, NA19103, NA18572, NA18948, NA21366, NA19208, NA11919, NA19177, NA19142, NA19150, NA12829, NA11893, NA19181, NA12056, NA19154, NA18857, NA19252, NA12144, NA10856, NA12546, NA19012, NA21316, NA18974, NA12043, NA21608, NA18953, NA18632, NA19256, NA18863, NA12272, NA21718, NA21390, NA12347, NA19117, NA18501, NA06994, NA07435, NA19223, NA19178, NA07349, NA19211, NA18636, NA18509, NA18609, NA11843, NA21384, NA18872, NA19121, NA18624, NA12154, NA18612, NA10837, NA18487, NA18620, NA18497, NA19141, NA21477, NA19186, NA21383, NA19249, NA11829, NA10845, NA12814, NA18507, NA21399, NA19145, NA18917, NA18603, NA12045, NA19092, NA18486, NA21648, NA12248, NA10857, NA19098, NA12155, NA07357, NA18967, NA19005, NA12812, NA19119, NA18635, NA19198, NA18860, NA12891, NA11992, NA21401, NA19138, NA18498, NA06993, NA18611, NA11917, NA12282, NA12005, NA21447, NA18970, NA18874, NA12274, NA06984, NA21512, NA21525, NA21453, NA21478, NA12889, NA21716, NA19189, NA21634, NA21442, NA18908, NA12375, NA19200, NA12748, NA19007, NA11831, NA21599, NA12335, NA19210, NA18934, NA12872, NA18859, NA19205, NA19236, NA18516, NA21439, NA18637, NA18910, NA18503, NA11839, NA10838, NA21485, NA19000, NA10830, NA18856, NA19113, NA18853, NA12827, NA12264, NA12817, NA19101, NA12766, NA21583, NA19160, NA18945, NA18608, NA06995, NA12716, NA11881, NA18961, NA18952, NA12864, NA12775, NA19174, NA19144, NA07051, NA18869, NA12874, NA18911, NA06986, NA19248, NA18971, NA19173, NA18994, NA10860, NA18500, NA18506, NA21581, NA21614, NA19096, NA18854, NA21312, NA21389, NA21490, NA19224, NA19146, NA21514, NA21440, NA18522, NA07034, NA18622, NA19153, NA18562, NA18965
Known GenesCPXCR1
MethodOligo aCGH
AnalysisADM2 threshold = 5
PlatformAgilent Eichler Human CNP 180K v3.0
Comments
ReferenceCampbell_et_al_2011
Pubmed ID21397061
Accession Number(s)nsv515219
Frequency
Sample Size2366
Observed Gain0
Observed Loss252
Observed Complex0
Frequencyn/a


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