A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv515203



Internal ID15466835
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
InnerchrX:49581989..49611142hg38UCSC Ensembl
InnerchrX:49346592..49375745hg19UCSC Ensembl
InnerchrX:49233536..49262692hg18UCSC Ensembl
CytobandXp11.23
Allele length
AssemblyAllele length
hg3829154
hg1929154
hg1829157
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv2989274, nssv2989322, nssv2989007, nssv2989472, nssv2989380, nssv2989340, nssv2989260, nssv2989158, nssv2989023, nssv2989389, nssv2989143, nssv2989330, nssv2989359, nssv2989263, nssv2989046, nssv2989171, nssv2989086, nssv2989208, nssv2989346, nssv2989057, nssv2989400, nssv2989277, nssv2989268, nssv2989484, nssv2989016, nssv2989434, nssv2989029, nssv2989283, nssv2989116, nssv2989369, nssv2989195, nssv2989212, nssv2989148, nssv2989150, nssv2989271, nssv2989463, nssv2989491, nssv2989018, nssv2989345, nssv2989394, nssv2989333, nssv2989363, nssv2989311, nssv2989146, nssv2989430, nssv2989080, nssv2989049, nssv2989285, nssv2989439, nssv2989219, nssv2989373, nssv2989099, nssv2989321, nssv2989118, nssv2989008, nssv2989370, nssv2989036, nssv2989181, nssv2989405, nssv2989305, nssv2989309, nssv2989230, nssv2989241, nssv2989487, nssv2989232, nssv2989249, nssv2989351, nssv2989244, nssv2989282, nssv2989436, nssv2989031, nssv2989353, nssv2989238, nssv2989126, nssv2989227, nssv2989307, nssv2989480, nssv2989358, nssv2989068, nssv2989062, nssv2989179, nssv2989413, nssv2989466, nssv2989398, nssv2989180, nssv2989364, nssv2989021, nssv2989261, nssv2989032, nssv2989047, nssv2989343, nssv2989444, nssv2989044, nssv2989222, nssv2989073, nssv2989134, nssv2989042, nssv2989252, nssv2989038, nssv2989367, nssv2989468, nssv2989295, nssv2989094, nssv2989176, nssv2989368, nssv2989050, nssv2989375, nssv2989416, nssv2989039, nssv2989255, nssv2989009, nssv2989071, nssv2989122, nssv2989236, nssv2989114, nssv2989110, nssv2989225, nssv2989399, nssv2989135, nssv2989354, nssv2989291, nssv2989396, nssv2989404, nssv2989095, nssv2989231, nssv2989265, nssv2989076, nssv2989103, nssv2989385, nssv2989411, nssv2989304, nssv2989061, nssv2989093, nssv2989237, nssv2989287, nssv2989090, nssv2989229, nssv2989362, nssv2989010, nssv2989098, nssv2989193, nssv2989278, nssv2989302, nssv2989183, nssv2989161, nssv2989147, nssv2989262, nssv2989273, nssv2989168, nssv2989420, nssv2989473, nssv2989281, nssv2989485, nssv2989155, nssv2989167, nssv2989386, nssv2989332, nssv2989254, nssv2989006, nssv2989464, nssv2989085, nssv2989245, nssv2989478, nssv2989033, nssv2989138, nssv2989257, nssv2989048, nssv2989253, nssv2989390, nssv2989374, nssv2989360, nssv2989452, nssv2989248, nssv2989462, nssv2989065, nssv2989423, nssv2989188, nssv2989382, nssv2989026, nssv2989341, nssv2989104, nssv2989088, nssv2989388, nssv2989438, nssv2989056, nssv2989465, nssv2989063, nssv2989077, nssv2989119, nssv2989196, nssv2989258, nssv2989177, nssv2989139, nssv2989417, nssv2989275, nssv2989288, nssv2989064, nssv2989072, nssv2989205, nssv2989184, nssv2989412, nssv2989479, nssv2989162, nssv2989474, nssv2989166, nssv2989488, nssv2989213, nssv2989324, nssv2989467, nssv2989471, nssv2989113, nssv2989461, nssv2989445, nssv2989490, nssv2989381, nssv2989395, nssv2989410, nssv2989137, nssv2989209, nssv2989334, nssv2989279, nssv2989356, nssv2989286, nssv2989460, nssv2989015, nssv2989329, nssv2989217, nssv2989376, nssv2989019, nssv2989070, nssv2989164, nssv2989210, nssv2989045, nssv2989242, nssv2989030, nssv2989453, nssv2989028, nssv2989059, nssv2989078, nssv2989415, nssv2989336, nssv2989350, nssv2989100, nssv2989115, nssv2989454, nssv2989144, nssv2989185, nssv2989344, nssv2989174, nssv2989066, nssv2989051, nssv2989024, nssv2989435, nssv2989218, nssv2989228, nssv2989371, nssv2989378, nssv2989055, nssv2989456, nssv2989259, nssv2989384, nssv2989087, nssv2989186, nssv2989197, nssv2989276, nssv2989443, nssv2989027, nssv2989201, nssv2989387, nssv2989408, nssv2989422, nssv2989235, nssv2989403, nssv2989407, nssv2989429, nssv2989448, nssv2989312, nssv2989270, nssv2989189, nssv2989447, nssv2989041, nssv2989096, nssv2989377, nssv2989079, nssv2989131, nssv2989105, nssv2989337, nssv2989053, nssv2989234, nssv2989200, nssv2989406, nssv2989326, nssv2989017, nssv2989327, nssv2989160, nssv2989101, nssv2989182, nssv2989489, nssv2989424, nssv2989481, nssv2989419, nssv2989157, nssv2989323, nssv2989264, nssv2989292, nssv2989425, nssv2989025, nssv2989247, nssv2989457, nssv2989125, nssv2989314, nssv2989111, nssv2989211, nssv2989331, nssv2989437, nssv2989450, nssv2989223, nssv2989226, nssv2989393, nssv2989214, nssv2989081, nssv2989083, nssv2989199, nssv2989313, nssv2989240, nssv2989317, nssv2989427, nssv2989012, nssv2989170, nssv2989290, nssv2989433, nssv2989284, nssv2989043, nssv2989108, nssv2989440, nssv2989486, nssv2989428, nssv2989409, nssv2989459, nssv2989303, nssv2989299, nssv2989011, nssv2989060, nssv2989206, nssv2989339, nssv2989483, nssv2989109, nssv2989325, nssv2989169, nssv2989418, nssv2989192, nssv2989202, nssv2989020, nssv2989441, nssv2989084, nssv2989132, nssv2989159, nssv2989127, nssv2989190, nssv2989269, nssv2989022, nssv2989306, nssv2989315, nssv2989355, nssv2989347, nssv2989383, nssv2989156, nssv2989163, nssv2989469, nssv2989239, nssv2989204, nssv2989120, nssv2989221, nssv2989246, nssv2989449, nssv2989392, nssv2989477, nssv2989391, nssv2989092, nssv2989117, nssv2989140, nssv2989361, nssv2989152, nssv2989194, nssv2989365, nssv2989154, nssv2989442, nssv2989294, nssv2989397, nssv2989426, nssv2989198, nssv2989296, nssv2989107, nssv2989142, nssv2989173, nssv2989318, nssv2989203, nssv2989224, nssv2989145, nssv2989034, nssv2989133, nssv2989175, nssv2989446, nssv2989207, nssv2989328, nssv2989401, nssv2989293, nssv2989319, nssv2989266, nssv2989074, nssv2989089, nssv2989067, nssv2989220, nssv2989187, nssv2989037, nssv2989280, nssv2989301, nssv2989402, nssv2989250, nssv2989451, nssv2989492, nssv2989298, nssv2989335, nssv2989316, nssv2989352, nssv2989191, nssv2989128, nssv2989289, nssv2989058, nssv2989106, nssv2989338, nssv2989112, nssv2989297, nssv2989035, nssv2989165, nssv2989482, nssv2989153, nssv2989300, nssv2989121, nssv2989082, nssv2989178, nssv2989141, nssv2989308, nssv2989052, nssv2989097, nssv2989075, nssv2989054, nssv2989476, nssv2989414, nssv2989458, nssv2989233, nssv2989379, nssv2989320, nssv2989040, nssv2989102, nssv2989172, nssv2989272, nssv2989005, nssv2989069, nssv2989013, nssv2989256, nssv2989091, nssv2989129, nssv2989348, nssv2989431, nssv2989421, nssv2989124, nssv2989149, nssv2989432, nssv2989216, nssv2989357, nssv2989349, nssv2989455, nssv2989366, nssv2989123, nssv2989251, nssv2989267, nssv2989014, nssv2989151, nssv2989372, nssv2989475, nssv2989342, nssv2989470, nssv2989130, nssv2989215, nssv2989310, nssv2989243, nssv2989136
SamplesNA10859, NA18503, NA12767, NA19012, NA19146, NA21634, NA11881, NA18621, NA19207, NA18870, NA19248, NA12154, NA12818, NA19127, NA12489, NA19194, NA18605, NA21438, NA07347, NA21512, NA19214, NA21441, NA18509, NA21390, NA18594, NA19192, NA18871, NA12286, NA07349, NA12801, NA18523, NA19114, NA18966, NA11920, NA19209, NA21447, NA12347, NA18501, NA19093, NA19120, NA19178, NA10839, NA11918, NA19191, NA12264, NA18859, NA19223, NA12815, NA10847, NA18545, NA18603, NA21718, NA18516, NA19186, NA06993, NA21423, NA18953, NA12828, NA18517, NA18947, NA19109, NA07019, NA12005, NA18489, NA19144, NA07348, NA12058, NA18507, NA10855, NA18860, NA21425, NA18994, NA07051, NA21454, NA10837, NA19257, NA21312, NA21361, NA21310, NA19180, NA19236, NA12766, NA12287, NA19151, NA19208, NA18862, NA21384, NA18949, NA18868, NA19143, NA12414, NA19140, NA11919, NA12763, NA19211, NA18967, NA19148, NA19239, NA11839, NA11840, NA12753, NA07034, NA21493, NA12004, NA18854, NA19199, NA18635, NA21488, NA18622, NA10846, NA19197, NA19107, NA18990, NA18636, NA18592, NA19096, NA21363, NA12273, NA12761, NA18956, NA21513, NA10852, NA18959, NA18609, NA18497, NA11843, NA12329, NA11831, NA18485, NA11894, NA12400, NA18637, NA11995, NA18916, NA18593, NA19181, NA12777, NA12234, NA21399, NA12144, NA12751, NA19190, NA19000, NA21442, NA19247, NA12239, NA12145, NA07346, NA12716, NA19129, NA19189, NA21525, NA18633, NA21316, NA12778, NA12348, NA12877, NA21388, NA18968, NA19102, NA12275, NA19005, NA18510, NA19119, NA21455, NA12485, NA19154, NA21382, NA10856, NA21303, NA21485, NA18978, NA11892, NA18961, NA19237, NA18925, NA10836, NA12283, NA18910, NA19141, NA18940, NA19235, NA12891, NA18987, NA12890, NA12146, NA07055, NA19138, NA12272, NA21476, NA10860, NA18909, NA19201, NA21439, NA06991, NA19193, NA19128, NA12812, NA18857, NA19115, NA12889, NA19116, NA21360, NA19123, NA19097, NA19132, NA21383, NA21480, NA10845, NA07022, NA12878, NA21362, NA11830, NA21366, NA19205, NA19225, NA18852, NA19224, NA12546, NA12248, NA18499, NA18924, NA19198, NA12045, NA10840, NA11829, NA12236, NA19130, NA19171, NA19240, NA12717, NA12874, NA18532, NA18853, NA19204, NA19113, NA18935, NA18981, NA21614, NA18908, NA19177, NA19249, NA06994, NA21387, NA21391, NA12274, NA12832, NA19185, NA12760, NA19092, NA21302, NA12335, NA18555, NA19200, NA19007, NA21365, NA11917, NA18519, NA19202, NA07000, NA12775, NA19121, NA10864, NA18980, NA21636, NA21494, NA07031, NA21526, NA07435, NA19142, NA19137, NA19183, NA10831, NA12827, NA18964, NA12718, NA18863, NA12043, NA19152, NA12249, NA18861, NA12750, NA10843, NA12748, NA21490, NA11930, NA12344, NA07037, NA21524, NA12802, NA19222, NA21317, NA18933, NA21580, NA18952, NA18975, NA07056, NA18874, NA19173, NA19174, NA19252, NA12752, NA12875, NA21478, NA21599, NA18612, NA18869, NA18500, NA21307, NA19149, NA21404, NA18550, NA18570, NA19003, NA21600, NA18511, NA06989, NA12340, NA21487, NA18948, NA12813, NA18969, NA18972, NA19150, NA18573, NA18608, NA21403, NA21479, NA18542, NA19184, NA21386, NA18855, NA18484, NA19210, NA12776, NA11893, NA18524, NA19108, NA18965, NA21489, NA18488, NA12341, NA12044, NA12376, NA18506, NA18873, NA19147, NA21400, NA10863, NA18632, NA19117, NA11882, NA19161, NA21309, NA12843, NA18998, NA18624, NA18934, NA18508, NA12056, NA18992, NA21686, NA12282, NA12336, NA12383, NA18566, NA11994, NA21615, NA21716, NA12155, NA18576, NA18960, NA12864, NA18563, NA07357, NA12873, NA21301, NA12343, NA18991, NA18930, NA12814, NA12740, NA18856, NA21359, NA07048, NA21453, NA21477, NA18547, NA19182, NA21523, NA12829, NA19256, NA21522, NA18973, NA21608, NA12830, NA19100, NA18970, NA12708, NA19153, NA18518, NA18537, NA18620, NA19122, NA19172, NA07014, NA12892, NA18572, NA19094, NA19103, NA06985, NA19206, NA21717, NA18498, NA18923, NA18486, NA06986, NA18522, NA21514, NA18875, NA18558, NA19098, NA10850, NA21648, NA12872, NA18504, NA19175, NA21381, NA18487, NA18564, NA18942, NA18997, NA19221, NA21475, NA21581, NA18562, NA19131, NA19159, NA18579, NA18974, NA21440, NA18945, NA21313, NA19145, NA21401, NA11832, NA19258, NA21486, NA10851, NA18582, NA18999, NA10857, NA18552, NA21635, NA18907, NA18911, NA19101, NA12749, NA18995, NA21344, NA06984, NA18867, NA21601, NA12375, NA18872, NA12156, NA12386, NA06995, NA21389, NA10835, NA18971, NA10830, NA18577, NA19099, NA11992, NA10838, NA18917, NA11993, NA12399, NA12842, NA19160, NA21583, NA18571, NA19179, NA12817, NA19118, NA18611, NA19095
Known GenesGAGE1, GAGE12C, GAGE12D, GAGE12E, GAGE12H, GAGE2A
MethodOligo aCGH
AnalysisADM2 threshold = 5
PlatformAgilent Eichler Human CNP 180K v3.0
Comments
ReferenceCampbell_et_al_2011
Pubmed ID21397061
Accession Number(s)nsv515203
Frequency
Sample Size2366
Observed Gain488
Observed Loss0
Observed Complex0
Frequencyn/a


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