A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv515193



Internal ID15813550
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
InnerchrX:35613118..35615650hg38UCSC Ensembl
InnerchrX:35631235..35633767hg19UCSC Ensembl
InnerchrX:35541156..35543688hg18UCSC Ensembl
CytobandXp21.1
Allele length
AssemblyAllele length
hg382533
hg192533
hg182533
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv2983267, nssv2988215, nssv2983283, nssv2988295, nssv2988301, nssv2983232, nssv2983255, nssv2988197, nssv2988184, nssv2983277, nssv2988220, nssv2988290, nssv2988202, nssv2988294, nssv2988316, nssv2988268, nssv2988239, nssv2983246, nssv2988229, nssv2988191, nssv2988263, nssv2988262, nssv2988189, nssv2988163, nssv2988218, nssv2983231, nssv2988187, nssv2983250, nssv2988271, nssv2988292, nssv2988310, nssv2988334, nssv2988306, nssv2988169, nssv2988258, nssv2988346, nssv2988312, nssv2988311, nssv2988305, nssv2988244, nssv2988228, nssv2988327, nssv2988173, nssv2988205, nssv2988251, nssv2988296, nssv2988293, nssv2988257, nssv2988170, nssv2988345, nssv2988185, nssv2988242, nssv2988192, nssv2988159, nssv2983272, nssv2988337, nssv2988186, nssv2988181, nssv2983240, nssv2988174, nssv2988253, nssv2988328, nssv2988340, nssv2983244, nssv2988350, nssv2988318, nssv2988267, nssv2988308, nssv2983234, nssv2988179, nssv2988304, nssv2988314, nssv2988213, nssv2988222, nssv2988208, nssv2988325, nssv2983236, nssv2983224, nssv2988219, nssv2988194, nssv2988188, nssv2983273, nssv2988315, nssv2988274, nssv2988347, nssv2983269, nssv2983288, nssv2988342, nssv2988297, nssv2988171, nssv2988221, nssv2984399, nssv2983263, nssv2988236, nssv2988279, nssv2988227, nssv2988319, nssv2988175, nssv2988283, nssv2988339, nssv2983289, nssv2988289, nssv2988309, nssv2988176, nssv2988300, nssv2988322, nssv2983229, nssv2988240, nssv2983274, nssv2988265, nssv2988165, nssv2988330, nssv2988332, nssv2983257, nssv2988344, nssv2988298, nssv2983226, nssv2988183, nssv2988338, nssv2988269, nssv2988204, nssv2983291, nssv2988313, nssv2988182, nssv2988285, nssv2988329, nssv2988207, nssv2988216, nssv2988193, nssv2988299, nssv2988158, nssv2983278, nssv2988235, nssv2983251, nssv2988212, nssv2988199, nssv2983225, nssv2983279, nssv2988233, nssv2983270, nssv2983276, nssv2988210, nssv2983254, nssv2988190, nssv2983260, nssv2983238, nssv2988168, nssv2988349, nssv2988331, nssv2988245, nssv2988243, nssv2983241, nssv2988203, nssv2983266, nssv2988249, nssv2983242, nssv2988323, nssv2988230, nssv2988302, nssv2988277, nssv2983268, nssv2988250, nssv2983256, nssv2988211, nssv2983237, nssv2983275, nssv2983243, nssv2988320, nssv2983290, nssv2983284, nssv2983262, nssv2988164, nssv2983280, nssv2988161, nssv2988317, nssv2988288, nssv2983261, nssv2988280, nssv2988206, nssv2988200, nssv2988273, nssv2988248, nssv2988241, nssv2988246, nssv2988261, nssv2988254, nssv2983259, nssv2988172, nssv2983264, nssv2988275, nssv2988195, nssv2988224, nssv2988226, nssv2983285, nssv2988270, nssv2988162, nssv2988234, nssv2983281, nssv2988217, nssv2988238, nssv2988209, nssv2988341, nssv2988201, nssv2988196, nssv2988198, nssv2988287, nssv2988155, nssv2983235, nssv2988232, nssv2988225, nssv2988266, nssv2988252, nssv2988156, nssv2988247, nssv2988180, nssv2988256, nssv2983245, nssv2983286, nssv2988282, nssv2988157, nssv2983248, nssv2988333, nssv2988167, nssv2988272, nssv2988260, nssv2988237, nssv2983271, nssv2988303, nssv2983247, nssv2983228, nssv2988255, nssv2988321, nssv2988286, nssv2988178, nssv2988281, nssv2988336, nssv2983239, nssv2988291, nssv2988326, nssv2988284, nssv2983233, nssv2988223, nssv2988324, nssv2988264, nssv2988276, nssv2988348, nssv2988177, nssv2983265, nssv2983253, nssv2988335, nssv2988166, nssv2988160, nssv2983230, nssv2983258, nssv2988278, nssv2983249, nssv2988307, nssv2988231, nssv2983252, nssv2983287, nssv2983282, nssv2988214, nssv2983227, nssv2988343, nssv2988259
SamplesNA19258, NA21317, NA12842, NA21524, NA21488, NA21423, NA18621, NA12286, NA18862, NA10851, NA18524, NA18935, NA12344, NA21310, NA18925, NA12801, NA18504, NA12340, NA12146, NA18959, NA21475, NA21301, NA18633, NA21522, NA18510, NA12750, NA12399, NA19107, NA18563, NA19192, NA19171, NA18940, NA18519, NA10835, NA10846, NA21359, NA18995, NA19191, NA18923, NA18558, NA18960, NA07048, NA07347, NA21381, NA19130, NA11930, NA19123, NA18868, NA11994, NA19207, NA19128, NA18966, NA18990, NA21523, NA19239, NA21387, NA21344, NA12777, NA21307, NA18605, NA21313, NA12760, NA12752, NA19120, NA07022, NA19194, NA19175, NA19161, NA12485, NA19184, NA18485, NA12877, NA18871, NA19103, NA18572, NA18948, NA21366, NA19208, NA11919, NA19177, NA19142, NA19150, NA12829, NA11893, NA19181, NA12056, NA19154, NA18857, NA19252, NA12144, NA10856, NA12546, NA19012, NA21316, NA18974, NA12043, NA21608, NA18953, NA18632, NA19256, NA19149, NA18863, NA12272, NA21718, NA21390, NA12347, NA19117, NA18501, NA06994, NA07435, NA19223, NA19178, NA07349, NA19211, NA18636, NA18509, NA18609, NA19102, NA18873, NA11843, NA19116, NA21384, NA18872, NA19121, NA18624, NA12154, NA18612, NA10837, NA18487, NA18620, NA18497, NA19141, NA21477, NA19186, NA21383, NA19249, NA11829, NA10845, NA12814, NA19122, NA18507, NA21399, NA19145, NA18917, NA18603, NA12045, NA19092, NA18486, NA21648, NA12248, NA10857, NA19098, NA12155, NA07357, NA18967, NA19005, NA12812, NA18489, NA19119, NA18635, NA19198, NA18860, NA12891, NA11992, NA21401, NA19197, NA19138, NA18498, NA06993, NA18611, NA11917, NA12282, NA12005, NA21447, NA18970, NA18874, NA12274, NA06984, NA21512, NA21525, NA21453, NA21478, NA12889, NA21716, NA19189, NA21634, NA21442, NA18908, NA12375, NA19200, NA12748, NA19007, NA11831, NA21599, NA12335, NA19247, NA19210, NA18934, NA12872, NA18859, NA19205, NA19236, NA18516, NA21439, NA18637, NA18910, NA18503, NA11839, NA10838, NA21485, NA19118, NA19000, NA10830, NA18856, NA19113, NA18853, NA12827, NA12264, NA12817, NA19101, NA12766, NA21583, NA19160, NA18945, NA18608, NA06995, NA12716, NA18909, NA11881, NA19108, NA18961, NA18952, NA12864, NA12775, NA19174, NA19144, NA07051, NA18869, NA12874, NA18911, NA06986, NA19248, NA18971, NA19173, NA18994, NA10860, NA18500, NA18506, NA21581, NA21614, NA19096, NA18854, NA21312, NA21389, NA21490, NA19224, NA19146, NA21514, NA21440, NA18522, NA07034, NA18622, NA19153, NA18562, NA18965
Known Genes
MethodOligo aCGH
AnalysisADM2 threshold = 5
PlatformAgilent Eichler Human CNP 180K v3.0
Comments
ReferenceCampbell_et_al_2011
Pubmed ID21397061
Accession Number(s)nsv515193
Frequency
Sample Size2366
Observed Gain0
Observed Loss265
Observed Complex0
Frequencyn/a


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