Variant Details

Variant: nsv515183

Internal ID

15813542

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
Inner	chrX:150062391..150081511	hg38	UCSC Ensembl
Inner	chrX:149230622..149249742	hg19	UCSC Ensembl
Inner	chrX:148981280..149000400	hg18	UCSC Ensembl

Cytoband

Xq28

Allele length

Assembly	Allele length
hg38	19121
hg19	19121
hg18	19121

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

nssv2982076, nssv2983045, nssv2982146, nssv2983023, nssv2982109, nssv2982093, nssv2982981, nssv2983001, nssv2982079, nssv2983007, nssv2982175, nssv2982092, nssv2982158, nssv2983008, nssv2982984, nssv2982090, nssv2982170, nssv2982141, nssv2982091, nssv2982132, nssv2982931, nssv2982118, nssv2982139, nssv2982117, nssv2982173, nssv2982982, nssv2982077, nssv2982947, nssv2982939, nssv2983028, nssv2982943, nssv2983029, nssv2983004, nssv2983030, nssv2983009, nssv2982150, nssv2982171, nssv2983026, nssv2983018, nssv2982951, nssv2982948, nssv2983022, nssv2982143, nssv2983035, nssv2982097, nssv2982069, nssv2983032, nssv2982998, nssv2982962, nssv2983019, nssv2982136, nssv2982958, nssv2982165, nssv2982965, nssv2982987, nssv2983052, nssv2983043, nssv2982162, nssv2982083, nssv2982954, nssv2983033, nssv2982164, nssv2982180, nssv2983010, nssv2982086, nssv2982065, nssv2982936, nssv2982151, nssv2982929, nssv2983031, nssv2982999, nssv2983025, nssv2982147, nssv2983011, nssv2982932, nssv2982964, nssv2983047, nssv2982114, nssv2983024, nssv2982148, nssv2982142, nssv2982167, nssv2982956, nssv2982953, nssv2983012, nssv2982156, nssv2982986, nssv2982068, nssv2982997, nssv2982990, nssv2982111, nssv2982138, nssv2982159, nssv2983016, nssv2982080, nssv2982078, nssv2983015, nssv2982974, nssv2983003, nssv2982959, nssv2982145, nssv2982094, nssv2982168, nssv2982073, nssv2983049, nssv2982122, nssv2982070, nssv2982101, nssv2982112, nssv2982100, nssv2982930, nssv2982991, nssv2983041, nssv2982119, nssv2982115, nssv2982153, nssv2982098, nssv2982088, nssv2982095, nssv2982935, nssv2982169, nssv2982928, nssv2982172, nssv2982089, nssv2982155, nssv2982110, nssv2982178, nssv2982969, nssv2982985, nssv2982926, nssv2982133, nssv2982154, nssv2983048, nssv2982085, nssv2983039, nssv2982945, nssv2982977, nssv2982161, nssv2982946, nssv2982107, nssv2982121, nssv2982113, nssv2982961, nssv2982163, nssv2982160, nssv2982992, nssv2982137, nssv2982944, nssv2982952, nssv2982074, nssv2982933, nssv2982084, nssv2982116, nssv2982087, nssv2982937, nssv2983036, nssv2982102, nssv2983020, nssv2982082, nssv2982182, nssv2982066, nssv2982927, nssv2982979, nssv2982166, nssv2982123, nssv2982963, nssv2983034, nssv2982996, nssv2982103, nssv2983042, nssv2983040, nssv2982075, nssv2982072, nssv2983013, nssv2982127, nssv2983046, nssv2982980, nssv2982942, nssv2982128, nssv2982184, nssv2982973, nssv2983044, nssv2982081, nssv2982971, nssv2982120, nssv2982131, nssv2982125, nssv2982067, nssv2982983, nssv2982105, nssv2982975, nssv2982950, nssv2983002, nssv2982177, nssv2982183, nssv2982955, nssv2982176, nssv2982949, nssv2982938, nssv2983038, nssv2983017, nssv2982135, nssv2982157, nssv2983053, nssv2982106, nssv2982970, nssv2982978, nssv2983027, nssv2982099, nssv2983051, nssv2982934, nssv2982179, nssv2982966, nssv2982976, nssv2982152, nssv2982957, nssv2982096, nssv2982071, nssv2982968, nssv2982924, nssv2982181, nssv2982108, nssv2982994, nssv2982988, nssv2982144, nssv2982923, nssv2982124, nssv2983050, nssv2982967, nssv2983014, nssv2982149, nssv2982925, nssv2982960, nssv2982972, nssv2983000, nssv2983005, nssv2983037, nssv2983006, nssv2982134, nssv2982129, nssv2982104, nssv2982126, nssv2982140, nssv2982993, nssv2982989, nssv2982174, nssv2982130, nssv2982941, nssv2982995, nssv2982940, nssv2983021

Samples

NA19258, NA21317, NA12842, NA21488, NA21423, NA18621, NA12286, NA18862, NA10851, NA18524, NA18935, NA12344, NA18925, NA12801, NA18504, NA12340, NA12146, NA18959, NA21475, NA21301, NA18633, NA21522, NA18510, NA12750, NA12399, NA19107, NA18563, NA19192, NA19171, NA18940, NA18519, NA10835, NA10846, NA21359, NA18995, NA19191, NA18923, NA18558, NA18960, NA07048, NA07347, NA21381, NA19130, NA19123, NA18868, NA11994, NA19207, NA19128, NA18966, NA18990, NA21523, NA19239, NA21387, NA21344, NA12777, NA21307, NA18605, NA21313, NA12760, NA12752, NA19120, NA07022, NA19194, NA19175, NA19161, NA12485, NA19184, NA18485, NA12877, NA18871, NA19103, NA18572, NA18948, NA21366, NA19208, NA11919, NA19177, NA19142, NA19150, NA12829, NA11893, NA19181, NA12056, NA19154, NA18857, NA19252, NA12144, NA10856, NA12546, NA19012, NA21316, NA18974, NA12043, NA21608, NA18953, NA18632, NA19256, NA18863, NA12272, NA21718, NA21390, NA12347, NA19117, NA18501, NA06994, NA07435, NA19223, NA19178, NA07349, NA19211, NA18636, NA18509, NA18609, NA11843, NA21384, NA18872, NA19121, NA18624, NA12154, NA18612, NA10837, NA18487, NA18620, NA18497, NA19141, NA21477, NA19186, NA21383, NA19249, NA11829, NA10845, NA12814, NA18507, NA21399, NA19145, NA18917, NA18603, NA12045, NA19092, NA18486, NA21648, NA12248, NA10857, NA19098, NA12155, NA07357, NA18967, NA19005, NA12812, NA19119, NA18635, NA19198, NA18860, NA12891, NA11992, NA21401, NA19138, NA18498, NA06993, NA18611, NA11917, NA12282, NA12005, NA21447, NA18970, NA18874, NA12274, NA06984, NA21512, NA21525, NA21453, NA21478, NA12889, NA21716, NA19189, NA21634, NA21442, NA18908, NA12375, NA19200, NA12748, NA19007, NA11831, NA21599, NA12335, NA19210, NA18934, NA12872, NA18859, NA19205, NA19236, NA18516, NA21439, NA18637, NA18910, NA18503, NA11839, NA10838, NA21485, NA19000, NA10830, NA18856, NA19113, NA18853, NA12827, NA12264, NA12817, NA19101, NA12766, NA21583, NA19160, NA18945, NA18608, NA06995, NA12716, NA11881, NA18961, NA18952, NA12864, NA12775, NA19174, NA19144, NA07051, NA18869, NA12874, NA18911, NA06986, NA19248, NA18971, NA19173, NA18994, NA10860, NA18500, NA18506, NA21581, NA21614, NA19096, NA18854, NA21312, NA21389, NA21490, NA19224, NA19146, NA21514, NA21440, NA18522, NA07034, NA18622, NA19153, NA18562, NA18965

Known Genes

Method

Oligo aCGH

Analysis

ADM2 threshold = 5

Platform

Agilent Eichler Human CNP 180K v3.0

Comments

Reference

Campbell_et_al_2011

Pubmed ID

21397061

Accession Number(s)

nsv515183

Frequency

Sample Size	2366
Observed Gain	0
Observed Loss	251
Observed Complex	0
Frequency	n/a