A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv515172



Internal ID15813531
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
InnerchrX:13459733..13464154hg38UCSC Ensembl
InnerchrX:13477852..13482273hg19UCSC Ensembl
InnerchrX:13387773..13392194hg18UCSC Ensembl
CytobandXp22.2
Allele length
AssemblyAllele length
hg384422
hg194422
hg184422
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv2981016, nssv2980965, nssv2980910, nssv2980928, nssv2980953, nssv2980956, nssv2985174, nssv2985142, nssv2985155, nssv2985191, nssv2980955, nssv2985176, nssv2981064, nssv2981011, nssv2981005, nssv2980959, nssv2980971, nssv2980976, nssv2985195, nssv2980958, nssv2981068, nssv2980951, nssv2981072, nssv2980968, nssv2980932, nssv2985153, nssv2980950, nssv2980942, nssv2985200, nssv2985181, nssv2985149, nssv2981008, nssv2980907, nssv2981018, nssv2980975, nssv2985172, nssv2980945, nssv2985154, nssv2981042, nssv2980901, nssv2981025, nssv2980996, nssv2985202, nssv2981039, nssv2981036, nssv2981044, nssv2980933, nssv2981034, nssv2980947, nssv2985170, nssv2980926, nssv2980929, nssv2980935, nssv2981049, nssv2985144, nssv2981067, nssv2981033, nssv2985141, nssv2980970, nssv2981015, nssv2981076, nssv2981026, nssv2985189, nssv2985199, nssv2980991, nssv2980978, nssv2985161, nssv2981040, nssv2980998, nssv2985138, nssv2981066, nssv2980899, nssv2981054, nssv2980994, nssv2980961, nssv2985193, nssv2985162, nssv2985143, nssv2981062, nssv2980982, nssv2985158, nssv2985177, nssv2980912, nssv2985146, nssv2980987, nssv2985197, nssv2980904, nssv2985178, nssv2981031, nssv2985165, nssv2985173, nssv2980925, nssv2981063, nssv2980905, nssv2981071, nssv2980916, nssv2980914, nssv2985183, nssv2981052, nssv2981074, nssv2980898, nssv2980897, nssv2981056, nssv2980911, nssv2985187, nssv2981003, nssv2981000, nssv2980917, nssv2981014, nssv2981065, nssv2985198, nssv2981035, nssv2981060, nssv2981020, nssv2981057, nssv2981013, nssv2985179, nssv2980924, nssv2980937, nssv2981023, nssv2981037, nssv2981041, nssv2985190, nssv2981004, nssv2980941, nssv2985192, nssv2981028, nssv2981017, nssv2980922, nssv2981021, nssv2981043, nssv2980969, nssv2981029, nssv2985140, nssv2980999, nssv2980990, nssv2981077, nssv2980944, nssv2980983, nssv2980993, nssv2981061, nssv2980997, nssv2980966, nssv2981075, nssv2981006, nssv2985151, nssv2980915, nssv2980960, nssv2985171, nssv2980930, nssv2985185, nssv2980963, nssv2981019, nssv2981055, nssv2980974, nssv2980927, nssv2981010, nssv2985182, nssv2980934, nssv2980946, nssv2981059, nssv2985145, nssv2981002, nssv2980900, nssv2985194, nssv2980962, nssv2981022, nssv2985152, nssv2981069, nssv2985188, nssv2980918, nssv2981050, nssv2980977, nssv2981038, nssv2980981, nssv2985163, nssv2985156, nssv2980967, nssv2985201, nssv2985184, nssv2985157, nssv2981012, nssv2980979, nssv2980957, nssv2985175, nssv2981007, nssv2980989, nssv2980936, nssv2985137, nssv2981073, nssv2980909, nssv2980902, nssv2985186, nssv2981053, nssv2980964, nssv2980938, nssv2981030, nssv2980921, nssv2980920, nssv2980980, nssv2981027, nssv2980986, nssv2980896, nssv2980988, nssv2980892, nssv2980939, nssv2981047, nssv2980903, nssv2980984, nssv2985196, nssv2985159, nssv2981051, nssv2981032, nssv2980923, nssv2980908, nssv2985166, nssv2985150, nssv2980952, nssv2981058, nssv2980949, nssv2985148, nssv2980954, nssv2985168, nssv2980992, nssv2980919, nssv2980972, nssv2980931, nssv2980895, nssv2985169, nssv2981048, nssv2981001, nssv2985180, nssv2981009, nssv2980906, nssv2985164, nssv2981046, nssv2981024, nssv2985147, nssv2981070, nssv2980913, nssv2980894, nssv2985160, nssv2985139, nssv2980985, nssv2980995, nssv2980943, nssv2980940, nssv2985167, nssv2981045, nssv2980893, nssv2980973, nssv2980948
SamplesNA19258, NA21317, NA12842, NA21488, NA21423, NA18621, NA12286, NA18862, NA10851, NA18524, NA18935, NA12344, NA18925, NA12801, NA18504, NA12340, NA12146, NA18959, NA21475, NA21301, NA18633, NA21522, NA18510, NA12750, NA12399, NA19107, NA18563, NA19192, NA19171, NA18940, NA18519, NA10835, NA10846, NA21359, NA18995, NA19191, NA18923, NA18558, NA18960, NA07048, NA07347, NA21381, NA19130, NA11930, NA19123, NA18868, NA11994, NA19207, NA19128, NA18966, NA18990, NA21523, NA19239, NA21387, NA21344, NA12777, NA21307, NA18605, NA21313, NA12760, NA12752, NA19120, NA07022, NA19194, NA19175, NA19161, NA12485, NA19184, NA18485, NA12877, NA18871, NA19103, NA18572, NA18948, NA21366, NA19208, NA11919, NA19177, NA19142, NA19150, NA12829, NA11893, NA19181, NA12056, NA19154, NA18857, NA19252, NA12144, NA10856, NA12546, NA19012, NA21316, NA18974, NA12043, NA21608, NA18953, NA18632, NA19256, NA18863, NA12272, NA21718, NA21390, NA12347, NA19117, NA18501, NA06994, NA07435, NA19223, NA19178, NA07349, NA19211, NA18636, NA18509, NA18609, NA11843, NA21384, NA18872, NA19121, NA18624, NA12154, NA18612, NA10837, NA18487, NA18620, NA18497, NA19141, NA21477, NA19186, NA21383, NA19249, NA11829, NA10845, NA12814, NA18507, NA21399, NA19145, NA18917, NA18603, NA12045, NA19092, NA18486, NA21648, NA12248, NA10857, NA19098, NA12155, NA07357, NA18967, NA19005, NA12812, NA19119, NA18635, NA19198, NA18860, NA12891, NA11992, NA21401, NA19138, NA18498, NA06993, NA18611, NA11917, NA12282, NA12005, NA21447, NA18970, NA18874, NA12274, NA06984, NA21512, NA21525, NA21453, NA21478, NA12889, NA21716, NA19189, NA21634, NA21442, NA18908, NA12375, NA19200, NA12748, NA19007, NA11831, NA21599, NA12335, NA19210, NA18934, NA12872, NA18859, NA19205, NA19236, NA18516, NA21439, NA18637, NA18910, NA18503, NA11839, NA10838, NA21485, NA19000, NA10830, NA18856, NA19113, NA18853, NA12827, NA12264, NA12817, NA19101, NA12766, NA21583, NA19160, NA18945, NA18608, NA06995, NA12716, NA11881, NA18961, NA18952, NA12864, NA12775, NA19174, NA19144, NA07051, NA18869, NA12874, NA18911, NA06986, NA19248, NA18971, NA19173, NA18994, NA10860, NA18500, NA18506, NA21581, NA21614, NA19096, NA18854, NA21312, NA21389, NA21490, NA19224, NA19146, NA21514, NA21440, NA18522, NA07034, NA18622, NA19153, NA18562, NA18965
Known Genes
MethodOligo aCGH
AnalysisADM2 threshold = 5
PlatformAgilent Eichler Human CNP 180K v3.0
Comments
ReferenceCampbell_et_al_2011
Pubmed ID21397061
Accession Number(s)nsv515172
Frequency
Sample Size2366
Observed Gain0
Observed Loss252
Observed Complex0
Frequencyn/a


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