A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv515169



Internal ID15813528
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
InnerchrX:126920096..127116368hg38UCSC Ensembl
InnerchrX:126054079..126250351hg19UCSC Ensembl
InnerchrX:125881760..126078032hg18UCSC Ensembl
CytobandXq25
Allele length
AssemblyAllele length
hg38196273
hg19196273
hg18196273
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv2979367, nssv2979515, nssv2979484, nssv2979391, nssv2979455, nssv2979534, nssv2979441, nssv2979451, nssv2979385, nssv2979527, nssv2979338, nssv2979359, nssv2979340, nssv2979551, nssv2979522, nssv2979433, nssv2979337, nssv2979316, nssv2979315, nssv2979540, nssv2979512, nssv2979321, nssv2979536, nssv2979454, nssv2979406, nssv2979437, nssv2979392, nssv2979401, nssv2979317, nssv2979432, nssv2979394, nssv2979462, nssv2979402, nssv2979546, nssv2979375, nssv2979311, nssv2979541, nssv2979525, nssv2979513, nssv2979554, nssv2979314, nssv2979487, nssv2979434, nssv2979505, nssv2979396, nssv2979526, nssv2979460, nssv2979411, nssv2979467, nssv2979343, nssv2979319, nssv2979458, nssv2979363, nssv2979328, nssv2979501, nssv2979453, nssv2979306, nssv2979377, nssv2979341, nssv2979519, nssv2979425, nssv2979482, nssv2979511, nssv2979520, nssv2979414, nssv2979387, nssv2979470, nssv2979424, nssv2979404, nssv2979431, nssv2979477, nssv2979518, nssv2979539, nssv2979466, nssv2979388, nssv2979531, nssv2979421, nssv2979489, nssv2979395, nssv2979496, nssv2979357, nssv2979429, nssv2979351, nssv2979324, nssv2979376, nssv2979374, nssv2979353, nssv2979410, nssv2979325, nssv2979389, nssv2979417, nssv2979529, nssv2979490, nssv2979339, nssv2979535, nssv2979456, nssv2979469, nssv2979438, nssv2979428, nssv2979330, nssv2979368, nssv2979461, nssv2979380, nssv2979497, nssv2979318, nssv2979350, nssv2979336, nssv2979331, nssv2979457, nssv2979365, nssv2979313, nssv2979362, nssv2979548, nssv2979412, nssv2979355, nssv2979446, nssv2979371, nssv2979508, nssv2979378, nssv2979305, nssv2979384, nssv2979448, nssv2979481, nssv2979323, nssv2979335, nssv2979542, nssv2979420, nssv2979430, nssv2979516, nssv2979503, nssv2979549, nssv2979303, nssv2979509, nssv2979373, nssv2979452, nssv2979360, nssv2979381, nssv2979480, nssv2979333, nssv2979443, nssv2979495, nssv2979479, nssv2979383, nssv2979354, nssv2979468, nssv2979308, nssv2979537, nssv2979442, nssv2979440, nssv2979523, nssv2979510, nssv2979393, nssv2979493, nssv2979332, nssv2979346, nssv2979326, nssv2979459, nssv2979382, nssv2979500, nssv2979408, nssv2979403, nssv2979348, nssv2979547, nssv2979409, nssv2979545, nssv2979543, nssv2979514, nssv2979407, nssv2979366, nssv2979370, nssv2979358, nssv2979347, nssv2979517, nssv2979327, nssv2979552, nssv2979399, nssv2979423, nssv2979504, nssv2979416, nssv2979444, nssv2979304, nssv2979307, nssv2979418, nssv2979532, nssv2979475, nssv2979364, nssv2979498, nssv2979533, nssv2979521, nssv2979463, nssv2979436, nssv2979349, nssv2979390, nssv2979507, nssv2979494, nssv2979476, nssv2979474, nssv2979310, nssv2979491, nssv2979447, nssv2979320, nssv2979471, nssv2979309, nssv2979372, nssv2979356, nssv2979342, nssv2979435, nssv2979405, nssv2979502, nssv2979524, nssv2979344, nssv2979445, nssv2979483, nssv2979485, nssv2979413, nssv2979398, nssv2979397, nssv2979345, nssv2979544, nssv2979553, nssv2979506, nssv2979465, nssv2979329, nssv2979538, nssv2979478, nssv2979450, nssv2979422, nssv2979415, nssv2979464, nssv2979472, nssv2979488, nssv2979449, nssv2979419, nssv2979312, nssv2979334, nssv2979499, nssv2979352, nssv2979426, nssv2979486, nssv2979386, nssv2979361, nssv2979322, nssv2979530, nssv2979379, nssv2979550, nssv2979528, nssv2979400, nssv2979369, nssv2979492, nssv2979473, nssv2979439, nssv2979427
SamplesNA19258, NA21317, NA12842, NA21488, NA21423, NA18621, NA12286, NA18862, NA10851, NA18524, NA18935, NA12344, NA18925, NA12801, NA18504, NA12340, NA12146, NA18959, NA21475, NA21301, NA18633, NA21522, NA18510, NA12750, NA12399, NA19107, NA18563, NA19192, NA19171, NA18940, NA18519, NA10835, NA10846, NA21359, NA18995, NA19191, NA18923, NA18558, NA18960, NA07048, NA07347, NA21381, NA19130, NA11930, NA19123, NA18868, NA11994, NA19207, NA19128, NA18966, NA18990, NA21523, NA19239, NA21387, NA21344, NA12777, NA21307, NA18605, NA21313, NA12760, NA12752, NA19120, NA07022, NA19194, NA19175, NA19161, NA12485, NA19184, NA18485, NA12877, NA18871, NA19103, NA18572, NA18948, NA21366, NA19208, NA11919, NA19177, NA19142, NA19150, NA12829, NA11893, NA19181, NA12056, NA19154, NA18857, NA19252, NA12144, NA10856, NA12546, NA19012, NA21316, NA18974, NA12043, NA21608, NA18953, NA18632, NA19256, NA18863, NA12272, NA21718, NA21390, NA12347, NA19117, NA18501, NA06994, NA07435, NA19223, NA19178, NA07349, NA19211, NA18636, NA18509, NA18609, NA11843, NA21384, NA18872, NA19121, NA18624, NA12154, NA18612, NA10837, NA18487, NA18620, NA18497, NA19141, NA21477, NA19186, NA21383, NA19249, NA11829, NA10845, NA12814, NA18507, NA21399, NA19145, NA18917, NA18603, NA12045, NA19092, NA18486, NA21648, NA12248, NA10857, NA19098, NA12155, NA07357, NA18967, NA19005, NA12812, NA19119, NA18635, NA19198, NA18860, NA12891, NA11992, NA21401, NA19138, NA18498, NA06993, NA18611, NA11917, NA12282, NA12005, NA21447, NA18970, NA18874, NA12274, NA06984, NA21512, NA21525, NA21453, NA21478, NA12889, NA21716, NA19189, NA21634, NA21442, NA18908, NA12375, NA19200, NA12748, NA19007, NA11831, NA21599, NA12335, NA19210, NA18934, NA12872, NA18859, NA19205, NA19236, NA18516, NA21439, NA18637, NA18910, NA18503, NA11839, NA10838, NA21485, NA19000, NA10830, NA18856, NA19113, NA18853, NA12827, NA12264, NA12817, NA19101, NA12766, NA21583, NA19160, NA18945, NA18608, NA06995, NA12716, NA11881, NA18961, NA18952, NA12864, NA12775, NA19174, NA19144, NA07051, NA18869, NA12874, NA18911, NA06986, NA19248, NA18971, NA19173, NA18994, NA10860, NA18500, NA18506, NA21581, NA21614, NA19096, NA18854, NA21312, NA21389, NA21490, NA19224, NA19146, NA21514, NA21440, NA18522, NA07034, NA18622, NA19153, NA18562, NA18965
Known Genes
MethodOligo aCGH
AnalysisADM2 threshold = 5
PlatformAgilent Eichler Human CNP 180K v3.0
Comments
ReferenceCampbell_et_al_2011
Pubmed ID21397061
Accession Number(s)nsv515169
Frequency
Sample Size2366
Observed Gain0
Observed Loss252
Observed Complex0
Frequencyn/a


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