A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv515163



Internal ID15466797
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
InnerchrX:11128177..11277520hg38UCSC Ensembl
InnerchrX:11146297..11295640hg19UCSC Ensembl
InnerchrX:11056218..11205561hg18UCSC Ensembl
CytobandXp22.2
Allele length
AssemblyAllele length
hg38149344
hg19149344
hg18149344
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv2975861, nssv2977917, nssv2977888, nssv2975800, nssv2977836, nssv2977892, nssv2977856, nssv2975871, nssv2975811, nssv2977907, nssv2977871, nssv2975813, nssv2977854, nssv2975768, nssv2975847, nssv2977893, nssv2975819, nssv2977885, nssv2975858, nssv2975792, nssv2975723, nssv2977899, nssv2975761, nssv2977912, nssv2975842, nssv2975746, nssv2977868, nssv2975840, nssv2977859, nssv2975762, nssv2977849, nssv2975742, nssv2975787, nssv2975851, nssv2977875, nssv2977845, nssv2977850, nssv2977910, nssv2975863, nssv2975814, nssv2977921, nssv2977879, nssv2975816, nssv2977835, nssv2975753, nssv2977838, nssv2977880, nssv2975853, nssv2975764, nssv2977858, nssv2975727, nssv2975812, nssv2977827, nssv2975741, nssv2975830, nssv2977891, nssv2977826, nssv2975872, nssv2977881, nssv2975809, nssv2975744, nssv2975743, nssv2977883, nssv2975857, nssv2975749, nssv2977887, nssv2977832, nssv2977900, nssv2975760, nssv2975849, nssv2977904, nssv2975766, nssv2977843, nssv2975838, nssv2977833, nssv2977831, nssv2975805, nssv2975732, nssv2975773, nssv2975866, nssv2975788, nssv2975748, nssv2977878, nssv2977865, nssv2977852, nssv2975789, nssv2975736, nssv2975854, nssv2975850, nssv2975827, nssv2975783, nssv2977923, nssv2975855, nssv2977903, nssv2977909, nssv2977851, nssv2977908, nssv2977861, nssv2977829, nssv2977844, nssv2975801, nssv2975745, nssv2977834, nssv2977906, nssv2975820, nssv2975731, nssv2975785, nssv2977825, nssv2975843, nssv2975852, nssv2975725, nssv2975836, nssv2975740, nssv2977847, nssv2977848, nssv2975781, nssv2977905, nssv2975734, nssv2975829, nssv2975767, nssv2975738, nssv2977872, nssv2975759, nssv2975817, nssv2977870, nssv2977862, nssv2975778, nssv2975730, nssv2977876, nssv2975790, nssv2975825, nssv2975757, nssv2975755, nssv2977874, nssv2975797, nssv2975793, nssv2975726, nssv2977855, nssv2975846, nssv2975795, nssv2975865, nssv2977839, nssv2977894, nssv2977857, nssv2977911, nssv2975868, nssv2975804, nssv2975780, nssv2977867, nssv2975798, nssv2975821, nssv2975860, nssv2975729, nssv2975831, nssv2977863, nssv2975794, nssv2975737, nssv2977877, nssv2975824, nssv2975834, nssv2975769, nssv2977902, nssv2975839, nssv2977869, nssv2975733, nssv2975864, nssv2975752, nssv2977916, nssv2975779, nssv2975728, nssv2975802, nssv2977897, nssv2975848, nssv2975796, nssv2977853, nssv2975844, nssv2977866, nssv2977828, nssv2975818, nssv2977882, nssv2975873, nssv2975803, nssv2975859, nssv2975823, nssv2977837, nssv2977884, nssv2975845, nssv2975862, nssv2975786, nssv2977919, nssv2977896, nssv2975806, nssv2975756, nssv2977889, nssv2975784, nssv2975867, nssv2975815, nssv2975835, nssv2975775, nssv2977864, nssv2977860, nssv2975810, nssv2975782, nssv2975828, nssv2975776, nssv2977840, nssv2975791, nssv2977841, nssv2975758, nssv2977914, nssv2975832, nssv2977895, nssv2975724, nssv2975826, nssv2975822, nssv2975735, nssv2977842, nssv2977830, nssv2975739, nssv2977915, nssv2977886, nssv2975754, nssv2975772, nssv2975751, nssv2975747, nssv2975722, nssv2977913, nssv2975771, nssv2977873, nssv2975799, nssv2977846, nssv2975770, nssv2975837, nssv2975841, nssv2975807, nssv2977922, nssv2977920, nssv2975808, nssv2975777, nssv2977901, nssv2975870, nssv2975856, nssv2975763, nssv2975874, nssv2975765, nssv2975833, nssv2977890, nssv2975774, nssv2977898, nssv2975750, nssv2975869, nssv2977918
SamplesNA19258, NA21317, NA12842, NA21488, NA21423, NA18621, NA12286, NA18862, NA10851, NA18524, NA18935, NA12344, NA18925, NA12801, NA18504, NA12340, NA12146, NA18959, NA21475, NA21301, NA18633, NA21522, NA18510, NA12750, NA12399, NA19107, NA18563, NA19192, NA19171, NA18940, NA18519, NA10835, NA10846, NA21359, NA18995, NA19191, NA18923, NA18558, NA18960, NA07048, NA07347, NA21381, NA19130, NA11930, NA19123, NA18868, NA11994, NA19207, NA19128, NA18966, NA18990, NA21523, NA19239, NA21387, NA21344, NA12777, NA21307, NA18605, NA21313, NA12760, NA12752, NA19120, NA07022, NA19194, NA19175, NA19161, NA12485, NA19184, NA18485, NA12877, NA18871, NA19103, NA18572, NA18948, NA21366, NA19208, NA11919, NA19177, NA19142, NA19150, NA12829, NA11893, NA19181, NA12056, NA19154, NA18857, NA19252, NA12144, NA10856, NA12546, NA19012, NA21316, NA18974, NA12043, NA21608, NA18953, NA18632, NA19256, NA18863, NA12272, NA21718, NA21390, NA12347, NA19117, NA18501, NA06994, NA07435, NA19223, NA19178, NA07349, NA19211, NA18636, NA18509, NA18609, NA11843, NA21384, NA18872, NA19121, NA18624, NA12154, NA18612, NA10837, NA18487, NA18620, NA18497, NA19141, NA21477, NA19186, NA21383, NA19249, NA11829, NA10845, NA12814, NA18507, NA21399, NA19145, NA18917, NA18603, NA12045, NA19092, NA18486, NA21648, NA12248, NA10857, NA19098, NA12155, NA07357, NA18967, NA19005, NA12812, NA19119, NA18635, NA19198, NA18860, NA12891, NA11992, NA21401, NA19138, NA18498, NA06993, NA18611, NA11917, NA12282, NA12005, NA21447, NA18970, NA18874, NA12274, NA06984, NA21512, NA21525, NA21453, NA21478, NA12889, NA21716, NA19189, NA21634, NA21442, NA18908, NA12375, NA19200, NA12748, NA19007, NA11831, NA21599, NA12335, NA19210, NA18934, NA12872, NA18859, NA19205, NA19236, NA18516, NA21439, NA18637, NA18910, NA18503, NA11839, NA10838, NA21485, NA19000, NA10830, NA18856, NA19113, NA18853, NA12827, NA12264, NA12817, NA19101, NA12766, NA21583, NA19160, NA18945, NA18608, NA06995, NA12716, NA11881, NA18961, NA18952, NA12864, NA12775, NA19174, NA19144, NA07051, NA18869, NA12874, NA18911, NA06986, NA19248, NA18971, NA19173, NA18994, NA10860, NA18500, NA18506, NA21581, NA21614, NA19096, NA18854, NA21312, NA21389, NA21490, NA19224, NA19146, NA21514, NA21440, NA18522, NA07034, NA18622, NA19153, NA18562, NA18965
Known GenesARHGAP6
MethodOligo aCGH
AnalysisADM2 threshold = 5
PlatformAgilent Eichler Human CNP 180K v3.0
Comments
ReferenceCampbell_et_al_2011
Pubmed ID21397061
Accession Number(s)nsv515163
Frequency
Sample Size2366
Observed Gain0
Observed Loss252
Observed Complex0
Frequencyn/a


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