Variant Details

Variant: nsv515160

Internal ID

15813519

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
Inner	chrX:101801475..101830891	hg38	UCSC Ensembl
Inner	chrX:101056448..101085864	hg19	UCSC Ensembl
Inner	chrX:100943104..100972520	hg18	UCSC Ensembl

Cytoband

Xq22.1

Allele length

Assembly	Allele length
hg38	29417
hg19	29417
hg18	29417

Variant Type

CNV gain+loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

nssv2977772, nssv2977690, nssv2977670, nssv2973720, nssv2977731, nssv2973736, nssv2973677, nssv2977773, nssv2977716, nssv2973663, nssv2973691, nssv2977756, nssv2977649, nssv2977676, nssv2977801, nssv2977710, nssv2977653, nssv2977733, nssv2977752, nssv2977816, nssv2977771, nssv2977775, nssv2973728, nssv2973672, nssv2977749, nssv2977664, nssv2977758, nssv2977685, nssv2977805, nssv2973705, nssv2977679, nssv2977743, nssv2973735, nssv2977745, nssv2973667, nssv2977662, nssv2977675, nssv2977815, nssv2977654, nssv2977742, nssv2977661, nssv2977799, nssv2973701, nssv2973679, nssv2977717, nssv2977698, nssv2977728, nssv2977760, nssv2977718, nssv2973730, nssv2977687, nssv2977723, nssv2973682, nssv2977754, nssv2977740, nssv2973724, nssv2973668, nssv2977678, nssv2977674, nssv2973743, nssv2973729, nssv2973702, nssv2973695, nssv2977777, nssv2977694, nssv2973741, nssv2973733, nssv2977671, nssv2973675, nssv2973666, nssv2973661, nssv2977744, nssv2977701, nssv2977741, nssv2973710, nssv2977721, nssv2973662, nssv2977808, nssv2977793, nssv2973689, nssv2973732, nssv2973725, nssv2977750, nssv2977663, nssv2973665, nssv2977804, nssv2973684, nssv2973713, nssv2977814, nssv2977767, nssv2973699, nssv2977807, nssv2977703, nssv2977782, nssv2977737, nssv2977747, nssv2977696, nssv2977809, nssv2973739, nssv2977800, nssv2973737, nssv2977784, nssv2973698, nssv2977802, nssv2977657, nssv2977824, nssv2977711, nssv2977722, nssv2973674, nssv2977732, nssv2977810, nssv2973680, nssv2977705, nssv2977803, nssv2977651, nssv2973671, nssv2977751, nssv2977757, nssv2977819, nssv2973685, nssv2977735, nssv2977702, nssv2973715, nssv2977792, nssv2977787, nssv2973738, nssv2977681, nssv2973673, nssv2977746, nssv2977656, nssv2977712, nssv2977660, nssv2973716, nssv2977697, nssv2977781, nssv2973681, nssv2977762, nssv2973711, nssv2977811, nssv2977788, nssv2977778, nssv2977817, nssv2977673, nssv2973734, nssv2973694, nssv2977650, nssv2977693, nssv2977789, nssv2973712, nssv2973707, nssv2973696, nssv2977736, nssv2977785, nssv2977768, nssv2977720, nssv2977823, nssv2977822, nssv2973686, nssv2973727, nssv2977726, nssv2973700, nssv2977725, nssv2973744, nssv2977774, nssv2977734, nssv2977755, nssv2977730, nssv2977688, nssv2977753, nssv2977763, nssv2977783, nssv2977709, nssv2977658, nssv2973693, nssv2977790, nssv2973745, nssv2977699, nssv2973703, nssv2973690, nssv2973704, nssv2977780, nssv2973676, nssv2977813, nssv2977812, nssv2977669, nssv2973718, nssv2977714, nssv2977700, nssv2977695, nssv2977708, nssv2973670, nssv2977748, nssv2973664, nssv2977672, nssv2977665, nssv2973714, nssv2973697, nssv2977759, nssv2977765, nssv2973709, nssv2977706, nssv2977686, nssv2973678, nssv2973692, nssv2973740, nssv2977764, nssv2973706, nssv2977820, nssv2977795, nssv2973717, nssv2977666, nssv2973683, nssv2977713, nssv2977680, nssv2977719, nssv2977677, nssv2977652, nssv2977715, nssv2973708, nssv2977821, nssv2977655, nssv2977684, nssv2977707, nssv2977794, nssv2977761, nssv2977683, nssv2977667, nssv2977796, nssv2973746, nssv2977668, nssv2973723, nssv2973726, nssv2973669, nssv2977791, nssv2977727, nssv2977806, nssv2977739, nssv2977818, nssv2977704, nssv2973687, nssv2977689, nssv2977797, nssv2973721, nssv2977738, nssv2977691, nssv2973731, nssv2973722, nssv2977770, nssv2977724, nssv2977779, nssv2977769, nssv2977659, nssv2973719, nssv2977798, nssv2977786, nssv2977729, nssv2973742, nssv2977682, nssv2977766, nssv2973688, nssv2977692, nssv2977776

Samples

NA19258, NA21317, NA12842, NA21488, NA21423, NA18621, NA12286, NA18862, NA10851, NA18524, NA18935, NA12344, NA12751, NA18925, NA12801, NA18504, NA12340, NA12146, NA18959, NA21475, NA21301, NA18633, NA21522, NA18510, NA12750, NA12399, NA19107, NA18563, NA19192, NA19171, NA18940, NA18519, NA10835, NA10846, NA21359, NA18995, NA19191, NA18923, NA18558, NA18960, NA07048, NA07347, NA21381, NA19130, NA11930, NA19123, NA18868, NA11994, NA19207, NA19128, NA18966, NA18990, NA21523, NA19239, NA21387, NA21344, NA12777, NA21307, NA18605, NA21313, NA12760, NA12752, NA19120, NA07022, NA19194, NA19175, NA12878, NA19161, NA12485, NA19184, NA18485, NA12877, NA18871, NA19103, NA18572, NA18948, NA21366, NA12234, NA19208, NA11919, NA19177, NA19142, NA19150, NA12829, NA11893, NA19181, NA12056, NA19154, NA18857, NA19252, NA12144, NA10856, NA12546, NA19012, NA21316, NA18974, NA12043, NA21608, NA18953, NA18632, NA19256, NA18863, NA12272, NA21718, NA21390, NA12347, NA19117, NA18501, NA06994, NA07435, NA19223, NA19178, NA07349, NA19211, NA18636, NA18509, NA18609, NA12875, NA11843, NA21384, NA18872, NA19121, NA18624, NA12154, NA18612, NA10837, NA18487, NA18620, NA18497, NA19141, NA21477, NA19186, NA21383, NA19249, NA11995, NA11829, NA10845, NA12814, NA18507, NA21399, NA19145, NA18917, NA18603, NA12045, NA19092, NA18486, NA21648, NA12248, NA10857, NA19098, NA12155, NA07357, NA18967, NA19005, NA12812, NA19119, NA18635, NA19198, NA18860, NA12891, NA12348, NA11992, NA21401, NA19138, NA18498, NA06993, NA18611, NA11917, NA12282, NA12005, NA21447, NA18970, NA18874, NA12274, NA06984, NA21512, NA21525, NA21453, NA21478, NA12889, NA21716, NA19189, NA21634, NA21442, NA18908, NA12375, NA19200, NA12748, NA19007, NA11831, NA21599, NA12335, NA19210, NA18934, NA12872, NA18859, NA19205, NA19236, NA18516, NA21439, NA18637, NA18910, NA18503, NA11839, NA10838, NA21485, NA19000, NA10830, NA18856, NA19113, NA18853, NA12827, NA12264, NA12817, NA19101, NA12766, NA21583, NA19160, NA18945, NA18608, NA06995, NA12716, NA11881, NA18961, NA18952, NA12864, NA12775, NA19174, NA19144, NA07051, NA18869, NA12874, NA07037, NA18911, NA06986, NA12740, NA19248, NA18971, NA19173, NA18987, NA18994, NA10860, NA18500, NA18506, NA21581, NA21614, NA19096, NA18854, NA21312, NA21389, NA21490, NA19224, NA19146, NA21514, NA21440, NA18522, NA07034, NA18622, NA19153, NA18562, NA12776, NA18965

Known Genes

Method

Oligo aCGH

Analysis

ADM2 threshold = 5

Platform

Agilent Eichler Human CNP 180K v3.0

Comments

Reference

Campbell_et_al_2011

Pubmed ID

21397061

Accession Number(s)

nsv515160

Frequency

Sample Size	2366
Observed Gain	10
Observed Loss	252
Observed Complex	0
Frequency	n/a