A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv515156



Internal ID15813515
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr9:80367185..80424169hg38UCSC Ensembl
Innerchr9:82982100..83039084hg19UCSC Ensembl
Innerchr9:82171920..82228904hg18UCSC Ensembl
Cytoband9q21.31
Allele length
AssemblyAllele length
hg3856985
hg1956985
hg1856985
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv2976906, nssv2976932, nssv2976904, nssv2976913, nssv2976916, nssv2976937, nssv2976903, nssv2976924, nssv2976912, nssv2976941, nssv2976918, nssv2976922, nssv2976943, nssv2976929, nssv2976911, nssv2976908, nssv2976926, nssv2976942, nssv2976909, nssv2976925, nssv2976907, nssv2976920, nssv2976905, nssv2976945, nssv2976939, nssv2976928, nssv2976919, nssv2976915, nssv2976940, nssv2976927, nssv2976930, nssv2976923, nssv2976921, nssv2976917, nssv2976931, nssv2976947, nssv2976946, nssv2976910, nssv2976935, nssv2976914, nssv2976934, nssv2976938, nssv2976936, nssv2976944, nssv2976902, nssv2976933
SamplesNA21636, NA21686, NA21488, NA18862, NA21476, NA21310, NA21489, NA21475, NA21635, NA21522, NA19127, NA21359, NA21600, NA19119, NA18860, NA19197, NA21365, NA21391, NA21447, NA19199, NA19207, NA21478, NA19189, NA19239, NA21442, NA21494, NA21480, NA21307, NA21313, NA19236, NA21439, NA21366, NA19177, NA18853, NA19252, NA19160, NA21302, NA19240, NA19174, NA19117, NA19093, NA18854, NA21312, NA21303, NA21490, NA21440
Known Genes
MethodOligo aCGH
AnalysisADM2 threshold = 5
PlatformAgilent Eichler Human CNP 180K v3.0
Comments
ReferenceCampbell_et_al_2011
Pubmed ID21397061
Accession Number(s)nsv515156
Frequency
Sample Size2366
Observed Gain0
Observed Loss46
Observed Complex0
Frequencyn/a


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