A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv515136



Internal ID15813495
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr9:28047762..28050622hg38UCSC Ensembl
Innerchr9:28047760..28050620hg19UCSC Ensembl
Innerchr9:28037760..28040620hg18UCSC Ensembl
Cytoband9p21.1
Allele length
AssemblyAllele length
hg382861
hg192861
hg182861
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv2970684, nssv2972113, nssv2970689, nssv2970692, nssv2970697, nssv2970675, nssv2970691, nssv2970676, nssv2972111, nssv2972107, nssv2970695, nssv2970685, nssv2972114, nssv2970679, nssv2970683, nssv2972116, nssv2972110, nssv2970681, nssv2972103, nssv2970688, nssv2972109, nssv2970696, nssv2970690, nssv2972105, nssv2970698, nssv2972115, nssv2970686, nssv2970678, nssv2970677, nssv2970680, nssv2972112, nssv2970694, nssv2970682, nssv2972106, nssv2972104, nssv2970687, nssv2972108, nssv2970693
SamplesNA12842, NA19249, NA12414, NA18603, NA21648, NA19098, NA18969, NA19107, NA19005, NA10846, NA18547, NA19138, NA21391, NA12889, NA19159, NA12828, NA21313, NA19247, NA19175, NA19113, NA12817, NA19257, NA12144, NA19095, NA18945, NA18974, NA18632, NA18909, NA18952, NA19174, NA19100, NA19144, NA19193, NA12874, NA18911, NA19117, NA21581, NA21312
Known GenesLINGO2
MethodOligo aCGH
AnalysisADM2 threshold = 5
PlatformAgilent Eichler Human CNP 180K v3.0
Comments
ReferenceCampbell_et_al_2011
Pubmed ID21397061
Accession Number(s)nsv515136
Frequency
Sample Size2366
Observed Gain0
Observed Loss38
Observed Complex0
Frequencyn/a


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