Variant Details

Variant: nsv514836

Internal ID

15466470

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
Inner	chr17:36089065..36168713	hg38	UCSC Ensembl
Inner	chr17:34416411..34496071	hg19	UCSC Ensembl
Inner	chr17:31440524..31520184	hg18	UCSC Ensembl

Cytoband

17q12

Allele length

Assembly	Allele length
hg38	79649
hg19	79661
hg18	79661

Variant Type

CNV gain

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

nssv2829904, nssv2829769, nssv2829752, nssv2829874, nssv2829836, nssv2829742, nssv2829746, nssv2829912, nssv2829710, nssv2829786, nssv2829738, nssv2829824, nssv2829690, nssv2829760, nssv2829789, nssv2829771, nssv2829879, nssv2829855, nssv2829712, nssv2829787, nssv2829839, nssv2829897, nssv2829816, nssv2829858, nssv2829902, nssv2829910, nssv2829828, nssv2829758, nssv2829717, nssv2829854, nssv2829909, nssv2829740, nssv2829729, nssv2829731, nssv2829831, nssv2829860, nssv2829726, nssv2829827, nssv2829842, nssv2829700, nssv2829765, nssv2829864, nssv2829826, nssv2829799, nssv2829748, nssv2829917, nssv2829841, nssv2829832, nssv2829901, nssv2829781, nssv2829795, nssv2829878, nssv2829770, nssv2829898, nssv2829801, nssv2829821, nssv2829721, nssv2829687, nssv2829851, nssv2829918, nssv2829759, nssv2829844, nssv2829811, nssv2829709, nssv2829782, nssv2829888, nssv2829873, nssv2829689, nssv2829783, nssv2829747, nssv2829803, nssv2829772, nssv2829892, nssv2829723, nssv2829845, nssv2829891, nssv2829857, nssv2829861, nssv2829749, nssv2829688, nssv2829818, nssv2829837, nssv2829907, nssv2829911, nssv2829883, nssv2829794, nssv2829890, nssv2829750, nssv2829815, nssv2829784, nssv2829736, nssv2829808, nssv2829893, nssv2829882, nssv2829819, nssv2829833, nssv2829775, nssv2829779, nssv2829867, nssv2829875, nssv2829708, nssv2829764, nssv2829757, nssv2829768, nssv2829761, nssv2829698, nssv2829716, nssv2829843, nssv2829743, nssv2829846, nssv2829915, nssv2829694, nssv2829767, nssv2829812, nssv2829838, nssv2829852, nssv2829715, nssv2829756, nssv2829834, nssv2829919, nssv2829713, nssv2829791, nssv2829877, nssv2829870, nssv2829862, nssv2829885, nssv2829735, nssv2829900, nssv2829777, nssv2829884, nssv2829724, nssv2829868, nssv2829753, nssv2829691, nssv2829722, nssv2829773, nssv2829813, nssv2829737, nssv2829856, nssv2829866, nssv2829814, nssv2829822, nssv2829920, nssv2829703, nssv2829820, nssv2829809, nssv2829876, nssv2829730, nssv2829807, nssv2829725, nssv2829778, nssv2829906, nssv2829810, nssv2829823, nssv2829805, nssv2829872, nssv2829825, nssv2829853, nssv2829727, nssv2829829, nssv2829790, nssv2829847, nssv2829718, nssv2829693, nssv2829886, nssv2829732, nssv2829869, nssv2829793, nssv2829895, nssv2829762, nssv2829739, nssv2829702, nssv2829806, nssv2829835, nssv2829734, nssv2829905, nssv2829802, nssv2829704, nssv2829889, nssv2829894, nssv2829850, nssv2829916, nssv2829741, nssv2829797, nssv2829763, nssv2829908, nssv2829914, nssv2829745, nssv2829692, nssv2829899, nssv2829751, nssv2829848, nssv2829707, nssv2829728, nssv2829699, nssv2829863, nssv2829887, nssv2829798, nssv2829871, nssv2829903, nssv2829697, nssv2829840, nssv2829881, nssv2829896, nssv2829800, nssv2829714, nssv2829744, nssv2829921, nssv2829788, nssv2829733, nssv2829913, nssv2829695, nssv2829776, nssv2829817, nssv2829830, nssv2829880, nssv2829705, nssv2829780, nssv2829849, nssv2829706, nssv2829720, nssv2829754, nssv2829804, nssv2829719, nssv2829755, nssv2829859, nssv2829785, nssv2829865, nssv2829701, nssv2829774, nssv2829792, nssv2829796, nssv2829711, nssv2829766, nssv2829696

Samples

NA07435, NA18503, NA19142, NA12767, NA19137, NA19146, NA21634, NA12827, NA19207, NA18870, NA18964, NA19248, NA12718, NA18863, NA19152, NA19194, NA18861, NA21438, NA19214, NA21441, NA18509, NA21390, NA07037, NA18594, NA19192, NA21524, NA18871, NA12286, NA21317, NA21580, NA07349, NA12801, NA18523, NA19114, NA18874, NA19174, NA12752, NA19209, NA18501, NA19120, NA18500, NA19149, NA19003, NA19191, NA18511, NA18859, NA06989, NA12815, NA18603, NA21487, NA21718, NA12813, NA06993, NA18972, NA18517, NA19109, NA18608, NA21403, NA18542, NA19184, NA18489, NA21386, NA19144, NA19210, NA07348, NA18507, NA18860, NA21425, NA18994, NA19257, NA21312, NA21361, NA21310, NA19236, NA12341, NA12044, NA19151, NA19208, NA18506, NA18862, NA19147, NA18632, NA19117, NA19140, NA21309, NA18934, NA18508, NA19148, NA19239, NA21686, NA12753, NA21493, NA12004, NA18854, NA19199, NA12383, NA18566, NA21615, NA21716, NA18960, NA19197, NA07357, NA19107, NA18990, NA21301, NA18991, NA18636, NA12740, NA19096, NA21363, NA12273, NA21359, NA12761, NA18956, NA21513, NA10852, NA21453, NA18497, NA18547, NA11843, NA19182, NA18485, NA11995, NA21608, NA19100, NA21399, NA18970, NA12751, NA19247, NA12708, NA07346, NA19129, NA19172, NA19189, NA19094, NA19103, NA21316, NA12778, NA19206, NA21717, NA12877, NA18923, NA18968, NA19102, NA21514, NA18875, NA18510, NA19119, NA18558, NA19098, NA21382, NA21648, NA18504, NA21303, NA21485, NA18978, NA21381, NA11892, NA18487, NA19237, NA18925, NA18997, NA12283, NA18562, NA19131, NA19159, NA19141, NA21313, NA18940, NA21401, NA19235, NA19258, NA21486, NA18987, NA18582, NA18999, NA19138, NA21635, NA18907, NA19101, NA19201, NA21439, NA12749, NA18995, NA21344, NA06984, NA18867, NA19193, NA12375, NA18872, NA19128, NA19115, NA06995, NA12889, NA19116, NA21360, NA19123, NA18971, NA19097, NA19132, NA19099, NA07022, NA21362, NA11830, NA21366, NA18852, NA19160, NA21583, NA18499, NA18924, NA19179, NA19095, NA10840, NA19130, NA19171, NA19240, NA12717, NA12874, NA18532, NA18853, NA19113, NA18935, NA21614, NA18908, NA19177, NA19249, NA21391, NA19092, NA21302, NA19202, NA19121, NA18980, NA21636, NA21494, NA21526

Known Genes

CCL3, CCL4, TBC1D3B

Method

Oligo aCGH

Analysis

ADM2 threshold = 5

Platform

Agilent Eichler Human CNP 180K v3.0

Comments

Reference

Campbell_et_al_2011

Pubmed ID

21397061

Accession Number(s)

nsv514836

Frequency

Sample Size	2366
Observed Gain	235
Observed Loss	0
Observed Complex	0
Frequency	n/a