A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv514624



Internal ID15812983
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr11:5763645..5788012hg38UCSC Ensembl
Innerchr11:5784875..5809242hg19UCSC Ensembl
Innerchr11:5741451..5765818hg18UCSC Ensembl
Cytoband11p15.4
Allele length
AssemblyAllele length
hg3824368
hg1924368
hg1824368
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv2781843, nssv2780085, nssv2785502, nssv2783600, nssv2787066, nssv2781115, nssv2788146, nssv2787017, nssv2780178, nssv2784187, nssv2783990, nssv2782295, nssv2781180, nssv2780752, nssv2780794, nssv2783649, nssv2779455, nssv2782856, nssv2784353, nssv2784807, nssv2780922, nssv2780180, nssv2785573, nssv2786149, nssv2782642, nssv2782693, nssv2786725, nssv2787453, nssv2785812, nssv2780153, nssv2782401, nssv2783193, nssv2782738, nssv2781295, nssv2780680, nssv2787510, nssv2786965, nssv2787151, nssv2783202, nssv2787613, nssv2788051, nssv2779994, nssv2781661, nssv2787214, nssv2778764, nssv2784126, nssv2785532, nssv2783800, nssv2784578, nssv2785574, nssv2782681, nssv2780863, nssv2785454, nssv2788119, nssv2785514, nssv2786545, nssv2782995, nssv2778715, nssv2783639, nssv2778975, nssv2786579, nssv2781593, nssv2787652, nssv2778524, nssv2787937, nssv2788184, nssv2784068, nssv2780367, nssv2779968, nssv2779162, nssv2786763, nssv2779163, nssv2786317, nssv2785751, nssv2780230, nssv2784504, nssv2782153, nssv2782905, nssv2782197, nssv2783401, nssv2783064, nssv2787953, nssv2783194, nssv2782250, nssv2783250, nssv2779827, nssv2784041, nssv2784110, nssv2783844, nssv2784982, nssv2783440, nssv2783378, nssv2781362, nssv2784923, nssv2786379, nssv2778857, nssv2787032, nssv2788333, nssv2781507, nssv2782786, nssv2784939, nssv2786822, nssv2778864, nssv2787504, nssv2780731, nssv2787007, nssv2785975, nssv2783614, nssv2787353, nssv2779930, nssv2786697, nssv2779334, nssv2779211, nssv2778531, nssv2780913, nssv2787660, nssv2786637, nssv2784424, nssv2785873, nssv2788369, nssv2787393, nssv2787788, nssv2786853, nssv2786729, nssv2782561, nssv2781258, nssv2783858, nssv2785013, nssv2779395, nssv2780054, nssv2779553, nssv2783247, nssv2781123, nssv2787162, nssv2784714, nssv2785679, nssv2779599, nssv2785732, nssv2786112, nssv2781891, nssv2781181, nssv2786233, nssv2785715, nssv2785378, nssv2779315, nssv2786298, nssv2781810, nssv2780388, nssv2781984, nssv2779373, nssv2782305, nssv2787591, nssv2785815, nssv2785978, nssv2784332, nssv2786532, nssv2779128, nssv2779772, nssv2779610, nssv2784020, nssv2779931, nssv2783526, nssv2782753, nssv2786788, nssv2784883, nssv2781947, nssv2785411, nssv2785336, nssv2782109, nssv2784717, nssv2780876, nssv2786472, nssv2783565, nssv2779679, nssv2785156, nssv2781662, nssv2781764, nssv2786452, nssv2779962, nssv2781799, nssv2781905, nssv2779558, nssv2779924, nssv2782124, nssv2779671, nssv2783657, nssv2779096, nssv2784763, nssv2781559, nssv2780425, nssv2781036, nssv2780130, nssv2779562, nssv2782672, nssv2781621
SamplesNA18497, NA19237, NA19141, NA12717, NA19222, NA21686, NA21477, NA12842, NA21488, NA21423, NA18621, NA12286, NA19249, NA11995, NA10845, NA10851, NA12273, NA12767, NA18855, NA21476, NA18935, NA18507, NA12843, NA21310, NA19145, NA18917, NA18486, NA12751, NA21489, NA12004, NA12146, NA18959, NA21475, NA21360, NA21635, NA12832, NA18870, NA18510, NA12750, NA12155, NA12341, NA19107, NA12813, NA19192, NA19005, NA18940, NA18519, NA12812, NA19201, NA10846, NA18489, NA21600, NA18995, NA21526, NA19198, NA21401, NA19197, NA12283, NA21381, NA21365, NA21391, NA19130, NA18611, NA12761, NA11930, NA12282, NA19199, NA21382, NA12274, NA21512, NA19137, NA11994, NA19235, NA19172, NA10850, NA19128, NA18966, NA21478, NA12889, NA19159, NA19189, NA18990, NA21601, NA21362, NA19239, NA12828, NA21442, NA21400, NA18908, NA11993, NA21599, NA21480, NA21307, NA18605, NA21313, NA19247, NA19210, NA12760, NA12752, NA18934, NA12753, NA19175, NA10863, NA19152, NA12872, NA19161, NA18933, NA19184, NA18485, NA19236, NA21439, NA12877, NA12718, NA18871, NA19103, NA18572, NA19097, NA11839, NA21438, NA10838, NA21366, NA12234, NA21485, NA19221, NA19202, NA18907, NA21441, NA19177, NA19142, NA18875, NA18518, NA19181, NA18499, NA11840, NA12056, NA12239, NA06989, NA18853, NA12264, NA19101, NA19225, NA12144, NA06985, NA21583, NA19160, NA19132, NA19095, NA12778, NA18570, NA21309, NA21316, NA18576, NA18632, NA19206, NA19183, NA12716, NA18564, NA12272, NA21425, NA10840, NA12874, NA21388, NA12347, NA06986, NA19182, NA18594, NA19143, NA12708, NA19117, NA18501, NA12740, NA19248, NA19178, NA12749, NA18509, NA18609, NA18873, NA21486, NA21384, NA21312, NA18972, NA18872, NA18552, NA21389, NA21303, NA21363, NA19129, NA19146, NA21487, NA18511, NA21440, NA10837, NA12776, NA18577, NA18620
Known GenesOR52N1, OR52N5
MethodOligo aCGH
AnalysisADM2 threshold = 5
PlatformAgilent Eichler Human CNP 180K v3.0
Comments
ReferenceCampbell_et_al_2011
Pubmed ID21397061
Accession Number(s)nsv514624
Frequency
Sample Size2366
Observed Gain0
Observed Loss195
Observed Complex0
Frequencyn/a


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