Variant DetailsVariant: nsv514351 | Internal ID | 15466039 | | Landmark | | | Location Information | | | Cytoband | 6p21.32 | | Allele length | | Assembly | Allele length | | hg38 | 5679 | | hg19 | 5679 | | hg18 | 5679 |
| | Variant Type | CNV loss | | Copy Number | | | Allele State | | | Allele Origin | | | Probe Count | | | Validation Flag | | | Merged Status | M | | Merged Variants | | | Supporting Variants | nssv2933038, nssv2933137, nssv2933002, nssv2933039, nssv2933086, nssv2933185, nssv2933150, nssv2933040, nssv2933238, nssv2932973, nssv2933241, nssv2933194, nssv2933014, nssv2933012, nssv2933099, nssv2933257, nssv2933183, nssv2934442, nssv2933209, nssv2933133, nssv2933115, nssv2933282, nssv2933029, nssv2932979, nssv2933096, nssv2933256, nssv2933046, nssv2932980, nssv2934428, nssv2934433, nssv2933267, nssv2933245, nssv2932965, nssv2933205, nssv2933093, nssv2932981, nssv2933277, nssv2933051, nssv2932989, nssv2933134, nssv2933123, nssv2933271, nssv2933064, nssv2933000, nssv2933214, nssv2933094, nssv2933211, nssv2933006, nssv2933221, nssv2933198, nssv2933259, nssv2932963, nssv2932970, nssv2933110, nssv2934431, nssv2933104, nssv2933174, nssv2933033, nssv2934437, nssv2934412, nssv2933153, nssv2933031, nssv2934432, nssv2933285, nssv2933281, nssv2933003, nssv2933197, nssv2933155, nssv2933107, nssv2933179, nssv2933128, nssv2933113, nssv2933066, nssv2933199, nssv2933191, nssv2933161, nssv2933170, nssv2933222, nssv2933190, nssv2933112, nssv2933088, nssv2933056, nssv2933001, nssv2933168, nssv2933015, nssv2933212, nssv2932991, nssv2932961, nssv2934421, nssv2933089, nssv2933085, nssv2933074, nssv2933266, nssv2933142, nssv2932966, nssv2933268, nssv2933010, nssv2933182, nssv2933280, nssv2933124, nssv2932964, nssv2933243, nssv2933173, nssv2933156, nssv2933087, nssv2934435, nssv2934436, nssv2933147, nssv2932957, nssv2933054, nssv2934417, nssv2934402, nssv2934425, nssv2933067, nssv2933203, nssv2934424, nssv2933196, nssv2933042, nssv2933254, nssv2933138, nssv2933079, nssv2934404, nssv2933171, nssv2932984, nssv2933290, nssv2933278, nssv2933262, nssv2932978, nssv2934429, nssv2933215, nssv2933121, nssv2933237, nssv2933165, nssv2934439, nssv2933149, nssv2933236, nssv2933166, nssv2933126, nssv2933059, nssv2933223, nssv2933132, nssv2933103, nssv2933069, nssv2933225, nssv2933145, nssv2934444, nssv2933227, nssv2932960, nssv2934422, nssv2933248, nssv2933213, nssv2933288, nssv2933169, nssv2933139, nssv2933008, nssv2934440, nssv2933244, nssv2933130, nssv2934438, nssv2933036, nssv2933253, nssv2933160, nssv2933255, nssv2933181, nssv2933016, nssv2933098, nssv2933193, nssv2933028, nssv2933116, nssv2933019, nssv2932992, nssv2933284, nssv2933283, nssv2932969, nssv2934430, nssv2933279, nssv2933136, nssv2933077, nssv2933273, nssv2934407, nssv2932974, nssv2932988, nssv2933208, nssv2933018, nssv2933022, nssv2933072, nssv2933082, nssv2933004, nssv2932976, nssv2932986, nssv2933275, nssv2933159, nssv2933058, nssv2933180, nssv2933187, nssv2933095, nssv2933047, nssv2933162, nssv2933009, nssv2933131, nssv2933141, nssv2933057, nssv2933143, nssv2933011, nssv2933135, nssv2933270, nssv2933091, nssv2932998, nssv2933228, nssv2933013, nssv2934408, nssv2933230, nssv2933206, nssv2933081, nssv2933118, nssv2933172, nssv2932985, nssv2933231, nssv2933120, nssv2932959, nssv2933152, nssv2933050, nssv2932971, nssv2932994, nssv2933049, nssv2933176, nssv2933240, nssv2933083, nssv2933260, nssv2932962, nssv2934420, nssv2933045, nssv2933017, nssv2933021, nssv2933263, nssv2933167, nssv2933210, nssv2933114, nssv2934409, nssv2934445, nssv2933188, nssv2933274, nssv2932996, nssv2933239, nssv2933233, nssv2933111, nssv2933140, nssv2933217, nssv2933242, nssv2933177, nssv2933105, nssv2934416, nssv2933265, nssv2933250, nssv2934415, nssv2934441, nssv2933272, nssv2933032, nssv2932993, nssv2932982, nssv2933060, nssv2933192, nssv2933106, nssv2933269, nssv2933146, nssv2934413, nssv2933027, nssv2934406, nssv2933151, nssv2933007, nssv2933020, nssv2933148, nssv2934426, nssv2934414, nssv2933154, nssv2932997, nssv2933163, nssv2933101, nssv2933235, nssv2933048, nssv2933092, nssv2932967, nssv2934419, nssv2933100, nssv2933025, nssv2933084, nssv2933289, nssv2933053, nssv2933102, nssv2933204, nssv2933122, nssv2933125, nssv2934423, nssv2933184, nssv2933044, nssv2933061, nssv2934434, nssv2933090, nssv2933144, nssv2933109, nssv2934401, nssv2933178, nssv2933207, nssv2933189, nssv2933202, nssv2932995, nssv2933224, nssv2933117, nssv2934418, nssv2933287, nssv2932958, nssv2934410, nssv2933247, nssv2933219, nssv2933063, nssv2932977, nssv2932975, nssv2933218, nssv2932983, nssv2933070, nssv2934411, nssv2933276, nssv2933186, nssv2933286, nssv2933158, nssv2933062, nssv2933175, nssv2934443, nssv2934400, nssv2933252, nssv2933041, nssv2933264, nssv2933229, nssv2933034, nssv2933055, nssv2932968, nssv2933200, nssv2933037, nssv2933080, nssv2933119, nssv2933129, nssv2933251, nssv2933201, nssv2933108, nssv2932999, nssv2933246, nssv2933249, nssv2933216, nssv2933075, nssv2933035, nssv2933078, nssv2933220, nssv2933164, nssv2933030, nssv2933043, nssv2933261, nssv2933097, nssv2933023, nssv2933071, nssv2933076, nssv2934399, nssv2933026, nssv2933195, nssv2934427, nssv2933234, nssv2933073, nssv2933005, nssv2933068, nssv2933024, nssv2932987, nssv2932990, nssv2932972, nssv2934403, nssv2933127, nssv2933291, nssv2933157, nssv2933065, nssv2933226, nssv2933052, nssv2933232, nssv2934405, nssv2933258 | | Samples | NA21636, NA21317, NA12842, NA21524, NA21488, NA21423, NA18621, NA12286, NA19204, NA18862, NA18861, NA18508, NA10851, NA12273, NA18524, NA12414, NA18855, NA18935, NA12843, NA11920, NA12344, NA21310, NA18999, NA12751, NA21489, NA18925, NA12801, NA18504, NA21475, NA21301, NA21635, NA12832, NA18633, NA12750, NA12399, NA19107, NA12813, NA07346, NA18563, NA19192, NA19171, NA18940, NA18519, NA10835, NA10846, NA21359, NA18995, NA12336, NA19191, NA12802, NA18923, NA18558, NA18547, NA18960, NA18916, NA07048, NA21479, NA11918, NA07347, NA18582, NA18571, NA21493, NA21365, NA19130, NA18949, NA11930, NA12275, NA19199, NA12156, NA11994, NA19207, NA19172, NA10850, NA19128, NA18990, NA21523, NA19239, NA21387, NA21400, NA21344, NA12777, NA21307, NA21313, NA12760, NA12489, NA12752, NA19120, NA07022, NA19194, NA19175, NA12878, NA19161, NA18485, NA12877, NA18579, NA12718, NA18871, NA19103, NA18948, NA21438, NA21366, NA18981, NA12234, NA19208, NA19202, NA18537, NA18573, NA11919, NA12386, NA18875, NA11893, NA19181, NA19151, NA11840, NA12056, NA18857, NA18532, NA06989, NA12145, NA19099, NA18555, NA19252, NA12144, NA18523, NA19132, NA12778, NA10856, NA18570, NA18593, NA12546, NA19012, NA21316, NA18974, NA12043, NA21608, NA18953, NA18632, NA06991, NA19115, NA19256, NA19149, NA19147, NA18517, NA18863, NA18564, NA21390, NA07348, NA21388, NA12763, NA12347, NA19182, NA18484, NA06994, NA07435, NA19223, NA10843, NA07349, NA18636, NA18509, NA12329, NA19185, NA12875, NA11843, NA19116, NA21384, NA18872, NA19121, NA21363, NA19129, NA11892, NA18968, NA18624, NA12890, NA21487, NA12154, NA10837, NA19214, NA18620, NA18997, NA21403, NA18497, NA19222, NA11830, NA21686, NA21477, NA19186, NA18924, NA19249, NA11829, NA10845, NA12767, NA18980, NA12236, NA18507, NA21399, NA18917, NA18603, NA19092, NA18486, NA18545, NA21648, NA21717, NA21386, NA12248, NA12058, NA19190, NA19098, NA18870, NA12400, NA12155, NA07357, NA12341, NA18967, NA18550, NA12812, NA19201, NA18489, NA19119, NA18635, NA19198, NA18860, NA12891, NA12348, NA19131, NA18942, NA11992, NA21401, NA19197, NA12283, NA12287, NA19138, NA18964, NA06993, NA18611, NA12761, NA12282, NA21447, NA18970, NA07019, NA19180, NA18874, NA12274, NA06984, NA21512, NA21454, NA19137, NA21525, NA21453, NA12889, NA12815, NA19159, NA19189, NA10855, NA21362, NA12828, NA21634, NA21442, NA18975, NA18908, NA18973, NA21494, NA12748, NA19007, NA11831, NA21480, NA12335, NA19247, NA19210, NA18934, NA12753, NA10836, NA12343, NA10863, NA10831, NA12872, NA18956, NA18859, NA19205, NA18991, NA18516, NA21439, NA18637, NA12376, NA18910, NA18503, NA19097, NA11839, NA21485, NA19179, NA19221, NA18566, NA21441, NA19114, NA19118, NA19000, NA07031, NA18518, NA18499, NA11894, NA10830, NA12249, NA19113, NA12239, NA18853, NA12264, NA19101, NA10852, NA19257, NA12766, NA19225, NA21583, NA19160, NA18945, NA18576, NA18978, NA06995, NA11882, NA19206, NA19183, NA18542, NA12716, NA18909, NA19108, NA18961, NA18952, NA12864, NA12775, NA10859, NA19240, NA21425, NA19144, NA07051, NA21615, NA10840, NA19193, NA12874, NA07037, NA21513, NA18911, NA06986, NA18594, NA19143, NA12708, NA12740, NA19109, NA19248, NA18971, NA21580, NA19173, NA18987, NA12749, NA18994, NA18500, NA18506, NA21581, NA21614, NA21486, NA19096, NA18854, NA21455, NA21312, NA18972, NA18552, NA21389, NA21490, NA18852, NA07056, NA19146, NA18488, NA19148, NA18511, NA07000, NA21514, NA21440, NA18522, NA07034, NA10864, NA18622, NA19153, NA18562, NA12776, NA18965 | | Known Genes | HLA-DQA1 | | Method | Oligo aCGH | | Analysis | ADM2 threshold = 5 | | Platform | Agilent Eichler Human CNP 180K v3.0 | | Comments | | | Reference | Campbell_et_al_2011 | | Pubmed ID | 21397061 | | Accession Number(s) | nsv514351
| | Frequency | | Sample Size | 2366 | | Observed Gain | 0 | | Observed Loss | 382 | | Observed Complex | 0 | | Frequency | n/a |
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