Variant Details

Variant: nsv514258

Internal ID

15465948

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
Inner	chr4:150960694..150962630	hg38	UCSC Ensembl
Inner	chr4:151881846..151883782	hg19	UCSC Ensembl
Inner	chr4:152101296..152103232	hg18	UCSC Ensembl

Cytoband

4q31.3

Allele length

Assembly	Allele length
hg38	1937
hg19	1937
hg18	1937

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

nssv2902783, nssv2902759, nssv2902815, nssv2902794, nssv2902750, nssv2902811, nssv2902809, nssv2902808, nssv2902766, nssv2902751, nssv2902827, nssv2902810, nssv2902789, nssv2902776, nssv2902824, nssv2902747, nssv2902760, nssv2902744, nssv2902753, nssv2902803, nssv2902767, nssv2902746, nssv2902800, nssv2902745, nssv2902784, nssv2902774, nssv2902834, nssv2902764, nssv2902838, nssv2902772, nssv2902836, nssv2902823, nssv2902819, nssv2902826, nssv2902749, nssv2902797, nssv2902770, nssv2902839, nssv2902763, nssv2902743, nssv2902801, nssv2902757, nssv2902777, nssv2902822, nssv2902791, nssv2902831, nssv2902781, nssv2902817, nssv2902806, nssv2902779, nssv2902758, nssv2902830, nssv2902786, nssv2902769, nssv2902807, nssv2902816, nssv2902814, nssv2902788, nssv2902790, nssv2902825, nssv2902765, nssv2902798, nssv2902796, nssv2902762, nssv2902792, nssv2902799, nssv2902785, nssv2902755, nssv2902795, nssv2902813, nssv2902812, nssv2902829, nssv2902804, nssv2902771, nssv2902802, nssv2902805, nssv2902782, nssv2902778, nssv2902752, nssv2902821, nssv2902761, nssv2902835, nssv2902832, nssv2902837, nssv2902773, nssv2902768, nssv2902748, nssv2902828, nssv2902818, nssv2902793, nssv2902756, nssv2902820, nssv2902775, nssv2902833, nssv2902780, nssv2902787, nssv2902754

Samples

NA19141, NA19222, NA21686, NA21317, NA19186, NA21488, NA21423, NA18924, NA19204, NA18862, NA18508, NA18855, NA19122, NA19145, NA21475, NA19190, NA18870, NA19107, NA19127, NA18519, NA19191, NA18860, NA21479, NA21401, NA18498, NA19180, NA19123, NA18874, NA18868, NA21454, NA19137, NA19172, NA19128, NA21478, NA19189, NA21601, NA19239, NA19209, NA21400, NA18908, NA21344, NA21599, NA21480, NA19210, NA19194, NA18859, NA19184, NA18485, NA19236, NA18516, NA18871, NA19103, NA21366, NA19142, NA19150, NA18875, NA18518, NA18856, NA19113, NA18853, NA19099, NA19101, NA19225, NA21583, NA21608, NA19115, NA19108, NA19256, NA18863, NA19140, NA19240, NA19174, NA21425, NA19100, NA19193, NA18869, NA19143, NA19117, NA19109, NA19248, NA21580, NA19178, NA19211, NA18509, NA19185, NA18506, NA18873, NA21614, NA19096, NA21455, NA18872, NA19121, NA19129, NA19224, NA18511, NA18522, NA18487

Known Genes

LRBA

Method

Oligo aCGH

Analysis

ADM2 threshold = 5

Platform

Agilent Eichler Human CNP 180K v3.0

Comments

Reference

Campbell_et_al_2011

Pubmed ID

21397061

Accession Number(s)

nsv514258

Frequency

Sample Size	2366
Observed Gain	0
Observed Loss	97
Observed Complex	0
Frequency	n/a