Variant Details

Variant: nsv514249

Internal ID

15812666

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
Inner	chr4:121361091..121367979	hg38	UCSC Ensembl
Inner	chr4:122282246..122289134	hg19	UCSC Ensembl
Inner	chr4:122501696..122508584	hg18	UCSC Ensembl

Cytoband

4q27

Allele length

Assembly	Allele length
hg38	6889
hg19	6889
hg18	6889

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

nssv2900907, nssv2900865, nssv2900898, nssv2900851, nssv2900876, nssv2900902, nssv2900852, nssv2900921, nssv2900861, nssv2900856, nssv2900859, nssv2900919, nssv2900913, nssv2900922, nssv2900875, nssv2900899, nssv2900905, nssv2900912, nssv2900908, nssv2900858, nssv2900883, nssv2900906, nssv2900887, nssv2900901, nssv2900924, nssv2900877, nssv2900862, nssv2900891, nssv2900903, nssv2900868, nssv2900893, nssv2900918, nssv2900857, nssv2900925, nssv2900897, nssv2900879, nssv2900920, nssv2900916, nssv2900881, nssv2900890, nssv2900854, nssv2900850, nssv2900847, nssv2900878, nssv2900927, nssv2900872, nssv2900846, nssv2900870, nssv2900909, nssv2900860, nssv2900889, nssv2900853, nssv2900894, nssv2900873, nssv2900910, nssv2900874, nssv2900848, nssv2900886, nssv2900917, nssv2900863, nssv2900914, nssv2900896, nssv2900884, nssv2900915, nssv2900892, nssv2900900, nssv2900904, nssv2900895, nssv2900867, nssv2900911, nssv2900882, nssv2900864, nssv2900869, nssv2900880, nssv2900885, nssv2900849, nssv2900855, nssv2900866, nssv2900888, nssv2900926, nssv2900923, nssv2900871

Samples

NA21403, NA18497, NA19258, NA19237, NA19222, NA12814, NA18524, NA18507, NA19145, NA18917, NA18603, NA12801, NA21301, NA19098, NA18870, NA18633, NA18550, NA12812, NA18558, NA18547, NA12283, NA18964, NA21391, NA21382, NA18874, NA18868, NA21454, NA12044, NA11994, NA19235, NA19159, NA21387, NA18908, NA12375, NA21344, NA19007, NA19194, NA18991, NA19236, NA18910, NA18572, NA19221, NA19177, NA07031, NA18875, NA19181, NA18499, NA18930, NA12892, NA19154, NA19257, NA18555, NA12766, NA19225, NA18523, NA18945, NA18974, NA21302, NA18608, NA19094, NA18978, NA18542, NA12775, NA19144, NA18992, NA21390, NA19193, NA18911, NA18594, NA21404, NA19223, NA19093, NA18506, NA21581, NA21455, NA21389, NA19121, NA19224, NA18624, NA19153, NA12776, NA18620

Known Genes

QRFPR

Method

Oligo aCGH

Analysis

ADM2 threshold = 5

Platform

Agilent Eichler Human CNP 180K v3.0

Comments

Reference

Campbell_et_al_2011

Pubmed ID

21397061

Accession Number(s)

nsv514249

Frequency

Sample Size	2366
Observed Gain	0
Observed Loss	82
Observed Complex	0
Frequency	n/a