Variant Details

Variant: nsv514211

Internal ID

15812628

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
Inner	chr4:44021118..44023694	hg38	UCSC Ensembl
Inner	chr4:44023135..44025711	hg19	UCSC Ensembl
Inner	chr4:43717892..43720468	hg18	UCSC Ensembl

Cytoband

4p13

Allele length

Assembly	Allele length
hg38	2577
hg19	2577
hg18	2577

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

nssv2908391, nssv2908405, nssv2908395, nssv2908392, nssv2908411, nssv2908420, nssv2908418, nssv2908432, nssv2908431, nssv2908394, nssv2908421, nssv2908413, nssv2908433, nssv2908435, nssv2908415, nssv2908400, nssv2908424, nssv2908399, nssv2908430, nssv2908414, nssv2908409, nssv2908406, nssv2908410, nssv2908429, nssv2908425, nssv2908417, nssv2908428, nssv2908408, nssv2908403, nssv2908402, nssv2908434, nssv2908423, nssv2908396, nssv2908426, nssv2908412, nssv2908427, nssv2908419, nssv2908404, nssv2908401, nssv2908407, nssv2908416, nssv2908398, nssv2908393, nssv2908397, nssv2908422

Samples

NA19222, NA21686, NA21477, NA21383, NA18862, NA18855, NA21399, NA21310, NA19145, NA21489, NA21648, NA21475, NA18870, NA21522, NA19201, NA21381, NA21365, NA21447, NA21382, NA19137, NA21453, NA21478, NA21601, NA21387, NA21599, NA19210, NA19175, NA21439, NA19114, NA19177, NA19150, NA18853, NA19099, NA19183, NA19115, NA19256, NA18863, NA19140, NA19174, NA19144, NA19182, NA19117, NA19102, NA21389, NA21363

Known Genes

Method

Oligo aCGH

Analysis

ADM2 threshold = 5

Platform

Agilent Eichler Human CNP 180K v3.0

Comments

Reference

Campbell_et_al_2011

Pubmed ID

21397061

Accession Number(s)

nsv514211

Frequency

Sample Size	2366
Observed Gain	0
Observed Loss	45
Observed Complex	0
Frequency	n/a