A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv510334



Internal ID15826360
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr13:46891440..46897440hg38UCSC Ensembl
Outerchr13:47465575..47471575hg19UCSC Ensembl
Outerchr13:46363576..46369576hg18UCSC Ensembl
Outerchr13:46363576..46369576hg17UCSC Ensembl
Cytoband13q14.2
Allele length
AssemblyAllele length
hg386001
hg196001
hg186001
hg176001
Variant TypeOTHER sequence alteration
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv621397, nssv624138
SamplesNA15510, NA18994
Known GenesHTR2A
MethodOptical mapping
AnalysisSingle-molecule optical maps were assembled into genome-wide consensus maps. These consensus maps were compared to a restriction map generated from the NCBI b35 human genome reference sequence.
PlatformOptical Mapping
Comments
ReferenceTeague_et_al_2010
Pubmed ID20534489
Accession Number(s)nsv510334
Frequency
Sample Size4
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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