A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv509035



Internal ID15476533
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr1:891406..985724hg38UCSC Ensembl
Outerchr1:826786..921104hg19UCSC Ensembl
Outerchr1:816649..910967hg18UCSC Ensembl
Outerchr1:866649..961171hg17UCSC Ensembl
Cytoband1p36.33
Allele length
AssemblyAllele length
hg383788
hg193788
hg183788
hg173788
Variant TypeCNV insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv621079, nssv619758
SamplesNA15510, NA10860
Known GenesC1orf170, KLHL17, LOC100130417, NOC2L, PLEKHN1, SAMD11
MethodOptical mapping
AnalysisSingle-molecule optical maps were assembled into genome-wide consensus maps. These consensus maps were compared to a restriction map generated from the NCBI b35 human genome reference sequence.
PlatformOptical Mapping
Comments
ReferenceTeague_et_al_2010
Pubmed ID20534489
Accession Number(s)nsv509035
Frequency
Sample Size4
Observed Gain2
Observed Loss0
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer