A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv508053



Internal ID15824080
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr1:184695759..184701759hg38UCSC Ensembl
Outerchr1:184664893..184670893hg19UCSC Ensembl
Outerchr1:182931516..182937516hg18UCSC Ensembl
Outerchr1:181396550..181402550hg17UCSC Ensembl
Cytoband1q25.3
Allele length
AssemblyAllele length
hg386001
hg196001
hg186001
hg176001
Variant TypeOTHER sequence alteration
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv622301, nssv624227
SamplesNA18994, NA10860
Known GenesEDEM3
MethodOptical mapping
AnalysisSingle-molecule optical maps were assembled into genome-wide consensus maps. These consensus maps were compared to a restriction map generated from the NCBI b35 human genome reference sequence.
PlatformOptical Mapping
Comments
ReferenceTeague_et_al_2010
Pubmed ID20534489
Accession Number(s)nsv508053
Frequency
Sample Size4
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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