A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv507990



Internal ID15824020
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
OuterchrX:114713706..114719715hg38UCSC Ensembl
OuterchrX:113948123..113954123hg19UCSC Ensembl
OuterchrX:113854379..113860379hg18UCSC Ensembl
OuterchrX:113771103..113777103hg17UCSC Ensembl
CytobandXq23
Allele length
AssemblyAllele length
hg386010
hg196001
hg186001
hg176001
Variant TypeOTHER sequence alteration
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv617983
SamplesCHM
Known GenesHTR2C, MIR1298
MethodOptical mapping
AnalysisSingle-molecule optical maps were assembled into genome-wide consensus maps. These consensus maps were compared to a restriction map generated from the NCBI b35 human genome reference sequence.
PlatformOptical Mapping
Comments
ReferenceTeague_et_al_2010
Pubmed ID20534489
Accession Number(s)nsv507990
Frequency
Sample Size4
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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