A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv507558



Internal ID15823588
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr10:59309293..59315293hg38UCSC Ensembl
Outerchr10:61069053..61075053hg19UCSC Ensembl
Outerchr10:60739059..60745059hg18UCSC Ensembl
Outerchr10:60739059..60745059hg17UCSC Ensembl
Cytoband10q21.1
Allele length
AssemblyAllele length
hg386001
hg196001
hg186001
hg176001
Variant TypeOTHER sequence alteration
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv623163, nssv619160, nssv620599
SamplesNA15510, NA18994, NA10860
Known GenesFAM13C
MethodOptical mapping
AnalysisSingle-molecule optical maps were assembled into genome-wide consensus maps. These consensus maps were compared to a restriction map generated from the NCBI b35 human genome reference sequence.
PlatformOptical Mapping
Comments
ReferenceTeague_et_al_2010
Pubmed ID20534489
Accession Number(s)nsv507558
Frequency
Sample Size4
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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