A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv507540



Internal ID15479219
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr10:12735566..12741566hg38UCSC Ensembl
Outerchr10:12777565..12783565hg19UCSC Ensembl
Outerchr10:12817571..12823571hg18UCSC Ensembl
Outerchr10:12817571..12823571hg17UCSC Ensembl
Cytoband10p13
Allele length
AssemblyAllele length
hg386001
hg196001
hg186001
hg176001
Variant TypeOTHER sequence alteration
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv619047, nssv620400, nssv623324, nssv617799
SamplesCHM, NA18994, NA15510, NA10860
Known GenesCAMK1D
MethodOptical mapping
AnalysisSingle-molecule optical maps were assembled into genome-wide consensus maps. These consensus maps were compared to a restriction map generated from the NCBI b35 human genome reference sequence.
PlatformOptical Mapping
Comments
ReferenceTeague_et_al_2010
Pubmed ID20534489
Accession Number(s)nsv507540
Frequency
Sample Size4
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer