A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv507321



Internal ID15822973
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr6:29730944..29736944hg38UCSC Ensembl
Outerchr6:29698721..29704721hg19UCSC Ensembl
Outerchr6:29806700..29812700hg18UCSC Ensembl
Outerchr6:29806700..29812700hg17UCSC Ensembl
Cytoband6p22.1
Allele length
AssemblyAllele length
hg386001
hg196001
hg186001
hg176001
Variant TypeOTHER sequence alteration
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv620336, nssv621833
SamplesNA15510, NA10860
Known GenesHLA-F-AS1
MethodOptical mapping
AnalysisSingle-molecule optical maps were assembled into genome-wide consensus maps. These consensus maps were compared to a restriction map generated from the NCBI b35 human genome reference sequence.
PlatformOptical Mapping
Comments
ReferenceTeague_et_al_2010
Pubmed ID20534489
Accession Number(s)nsv507321
Frequency
Sample Size4
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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