A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv499781



Internal ID15815877
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr13:47614888..47619118hg38UCSC Ensembl
chr13:48189023..48193253hg19UCSC Ensembl
chr13:47087024..47091254hg18UCSC Ensembl
Cytoband13q14.2
Allele length
AssemblyAllele length
hg384231
hg194231
hg184231
Variant TypeOTHER inversion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv585504
Samples
Known Genes
MethodSequencing
AnalysisFor each individuals we constructed a whole genomic library of approximately 1 million clones using a fosdmid subcloning strategy Paried end sequences from each clone were sequenced and searched against NCBI build35. Individual fosmid clones corresponding to regions of structural difference relative to the genome reference were selected and sequenced. The breakpoints determined from complete fosmid sequencing are given using the NCBI build36 genome assembly.
PlatformCapillary
Comments
ReferenceKidd_et_al_2010b
Pubmed ID21111241
Accession Number(s)nsv499781
Frequency
Sample Size9
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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