A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv499128



Internal ID15815224
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chrX:101602194..101616246hg38UCSC Ensembl
chrX:100857178..100871236hg19UCSC Ensembl
chrX:100743834..100757892hg18UCSC Ensembl
CytobandXq22.1
Allele length
AssemblyAllele length
hg3814053
hg1914059
hg1814059
Variant TypeOTHER inversion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv585587
Samples
Known GenesARMCX6
MethodSequencing
AnalysisFor each individuals we constructed a whole genomic library of approximately 1 million clones using a fosdmid subcloning strategy Paried end sequences from each clone were sequenced and searched against NCBI build35. Individual fosmid clones corresponding to regions of structural difference relative to the genome reference were selected and sequenced. The breakpoints determined from complete fosmid sequencing are given using the NCBI build36 genome assembly.
PlatformCapillary
Comments
ReferenceKidd_et_al_2010b
Pubmed ID21111241
Accession Number(s)nsv499128
Frequency
Sample Size9
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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