A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv478999



Internal ID15231739
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr1:224190703..224190703hg38UCSC Ensembl
chr1:224378405..224378405hg19UCSC Ensembl
chr1:222445028..222445028hg18UCSC Ensembl
chr1:220685140..220685140hg17UCSC Ensembl
Cytoband1q42.11
Allele length
AssemblyAllele length
hg381
hg191
hg181
hg171
Variant TypeCNV novel sequence insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv3014664
Samples
Known GenesDEGS1
MethodSequencing
AnalysisSearch fosmid ESPs as described in Tuzun et al (2005)
PlatformAgilent Custom Human 244K CGH Array
CommentsOEA singleton. The coordinate provided is from the mappable member of a fosmid end sequence pair, and indicates the genomic vicinity of a novel sequence insertion
ReferenceKidd_et_al_2010
Pubmed ID20440878
Accession Number(s)nsv478999
Frequency
Sample Size9
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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