A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv477664



Internal ID15230404
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr5:130148412..130148412hg38UCSC Ensembl
chr5:129484105..129484105hg19UCSC Ensembl
chr5:129512004..129512004hg18UCSC Ensembl
chr5:129512004..129512004hg17UCSC Ensembl
Cytoband5q23.3
Allele length
AssemblyAllele length
hg381
hg191
hg181
hg171
Variant TypeCNV novel sequence insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv3018981
SamplesNA18517
Known GenesCHSY3
MethodSequencing
AnalysisSearch fosmid ESPs as described in Tuzun et al (2005)
PlatformAgilent Custom Human 244K CGH Array
CommentsOEA singleton. The coordinate provided is from the mappable member of a fosmid end sequence pair, and indicates the genomic vicinity of a novel sequence insertion
ReferenceKidd_et_al_2010
Pubmed ID20440878
Accession Number(s)nsv477664
Frequency
Sample Size9
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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