A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv475965



Internal ID15228717
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr17:44345602..44345602hg38UCSC Ensembl
chr17:42422970..42422970hg19UCSC Ensembl
chr17:39778496..39778496hg18UCSC Ensembl
chr17:39778496..39778496hg17UCSC Ensembl
Cytoband17q21.31
Allele length
AssemblyAllele length
hg381
hg191
hg181
hg171
Variant TypeCNV novel sequence insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv3015330
SamplesNA12878
Known GenesGRN
MethodSequencing
AnalysisSearch fosmid ESPs as described in Tuzun et al (2005)
PlatformAgilent Custom Human 244K CGH Array
CommentsOEA singleton. The coordinate provided is from the mappable member of a fosmid end sequence pair, and indicates the genomic vicinity of a novel sequence insertion
ReferenceKidd_et_al_2010
Pubmed ID20440878
Accession Number(s)nsv475965
Frequency
Sample Size9
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer