A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv474490



Internal ID15227240
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr12:88068297..88068297hg38UCSC Ensembl
chr12:88462074..88462074hg19UCSC Ensembl
chr12:86986205..86986205hg18UCSC Ensembl
chr12:86964542..86964542hg17UCSC Ensembl
Cytoband12q21.32
Allele length
AssemblyAllele length
hg381
hg191
hg181
hg171
Variant TypeCNV novel sequence insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv3016649
SamplesNA18956
Known GenesCEP290
MethodSequencing
AnalysisSearch fosmid ESPs as described in Tuzun et al (2005)
PlatformAgilent Custom Human 244K CGH Array
CommentsOEA singleton. The coordinate provided is from the mappable member of a fosmid end sequence pair, and indicates the genomic vicinity of a novel sequence insertion
ReferenceKidd_et_al_2010
Pubmed ID20440878
Accession Number(s)nsv474490
Frequency
Sample Size9
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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