A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv474128



Internal ID15226878
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr4:86647717..86647717hg38UCSC Ensembl
chr4:87568870..87568870hg19UCSC Ensembl
chr4:87787894..87787894hg18UCSC Ensembl
chr4:87926049..87926049hg17UCSC Ensembl
Cytoband4q21.3
Allele length
AssemblyAllele length
hg381
hg191
hg181
hg171
Variant TypeCNV novel sequence insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv3015810
SamplesNA18507
Known GenesPTPN13
MethodSequencing
AnalysisSearch fosmid ESPs as described in Tuzun et al (2005)
PlatformAgilent Custom Human 244K CGH Array
CommentsOEA singleton. The coordinate provided is from the mappable member of a fosmid end sequence pair, and indicates the genomic vicinity of a novel sequence insertion
ReferenceKidd_et_al_2010
Pubmed ID20440878
Accession Number(s)nsv474128
Frequency
Sample Size9
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer