Variant Details

Variant: nsv471769

Internal ID

15214684

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
Inner	chr1:15607978..15610927	hg38	UCSC Ensembl
Outer	chr1:15606478..15611927	hg38	UCSC Ensembl
Inner	chr1:15934473..15937422	hg19	UCSC Ensembl
Outer	chr1:15932973..15938422	hg19	UCSC Ensembl
Inner	chr1:15807060..15810009	hg18	UCSC Ensembl
Outer	chr1:15805560..15811009	hg18	UCSC Ensembl
Inner	chr1:15679779..15682728	hg17	UCSC Ensembl
Outer	chr1:15678279..15683728	hg17	UCSC Ensembl

Cytoband

1p36.21

Allele length

Assembly	Allele length
hg38	5450
hg19	5450
hg18	5450
hg17	5450

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

nssv646050

Samples

Known Genes

Method

Oligo aCGH

Analysis

Haploid hybridization data was used to identify genomic intervals showing reduced hybridization signal in comparison to the reference human genome sequence.

Platform

Custom Perlegen arrays

Comments

Reference

Hinds_et_al_2006

Pubmed ID

16327809

Accession Number(s)

nsv471769

Frequency

Sample Size	95
Observed Gain	n/a
Observed Loss	n/a
Observed Complex	n/a
Frequency	n/a