| Internal ID | 15211997 |
| Landmark | |
| Location Information | |
| Cytoband | 1q44 |
| Allele length | | Assembly | Allele length | | hg38 | 49144 | | hg19 | 49144 | | hg18 | 49144 | | hg17 | 49144 |
|
| Variant Type | CNV loss |
| Copy Number | |
| Allele State | |
| Allele Origin | |
| Probe Count | |
| Validation Flag | |
| Merged Status | M |
| Merged Variants | |
| Supporting Variants | nssv547886, nssv547885 |
| Samples | YH, JDW |
| Known Genes | OR2T10, OR2T11 |
| Method | Sequencing |
| Analysis | We constructed duplication maps for each of the three genomes and estimated the absolute copy number of each duplication interval larger than 20 kb in length. We considered a given segment to be duplicated within an individual if the median estimated copy number for that individual was >2.5. |
| Platform | Illumina Genome Analyzer and Roche/454 sequencer. For arrayCGH validation experiments we used Nimblegen |
| Comments | OR2T10 |
| Reference | Alkan_et_al_2009 |
| Pubmed ID | 19718026 |
| Accession Number(s) | nsv471517
|
| Frequency | | Sample Size | 3 | | Observed Gain | 0 | | Observed Loss | 2 | | Observed Complex | 0 | | Frequency | n/a |
|
