A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv470741



Internal ID6059741
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr1:155115260..155230131hg19UCSC Ensembl
Innerchr1:153381884..153496755hg18UCSC Ensembl
Cytoband1q22
Allele length
AssemblyAllele length
hg19n/a
hg18n/a
Variant TypeCNV Loss
Copy Number
Allele State
Allele OriginNot tested
Probe Count
Merged StatusS
Merged Variants
Supporting Variantsnssv547781
SamplesHGDP01412
Known GenesFAM189B, GBA, GBAP1, KRTCAP2, MIR92B, MTX1, MUC1, SCAMP3, THBS3, TRIM46
Method
AnalysisOverlapping CNVs were merged. The positions are based on the farthest SNPs observed anomg any individuals with the CNV.
PlatformIllumina HumanHap550 Genotyping BeadChip v1 + v3
Comments
ReferenceJakobsson et al 2008
Pubmed ID18288195
Accession Number(s)nsv470741
Frequency
Sample Size443
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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