A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv469885



Internal ID15534600
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr11:55678817..55851147hg38UCSC Ensembl
Innerchr11:55446293..55618623hg19UCSC Ensembl
Innerchr11:55202869..55375199hg18UCSC Ensembl
Innerchr11:55221653..55393983hg16UCSC Ensembl
Cytoband11q11
Allele length
AssemblyAllele length
hg38172331
hg19172331
hg18172331
hg16172331
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv1673759, nssv1672840, nssv1674464, nssv1674312
Samples
Known GenesOR5D13, OR5D14, OR5D16, OR5D18, OR5L1, OR5L2
MethodBAC aCGH
AnalysisA locus was considered a CNV if the log ratio of fluorescence measurements for the individuals assayed exceeded twice the SD of the autosomal clones in both dye-swapped experiments.
PlatformGPL4010
Comments
ReferenceLocke_et_al_2006
Pubmed ID16826518
Accession Number(s)nsv469885
Frequency
Sample Size265
Observed Gain0
Observed Loss4
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer