A curated catalogue of human genomic structural variation




Variant Details

Variant: nsv469874



Internal ID15534589
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
InnerchrY:17847092..18047067hg38UCSC Ensembl
InnerchrY:19958972..20208953hg19UCSC Ensembl
InnerchrY:18468366..18668341hg18UCSC Ensembl
InnerchrY:18904162..19104137hg16UCSC Ensembl
CytobandYq11.221
Allele length
AssemblyAllele length
hg38199976
hg19249982
hg18199976
hg16199976
Variant TypeCNV gain+loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsnssv1675479, nssv1676057, nssv1673919, nssv1672430, nssv1675353
Samples
Known GenesCDY2A, CDY2B
MethodBAC aCGH
AnalysisA locus was considered a CNV if the log ratio of fluorescence measurements for the individuals assayed exceeded twice the SD of the autosomal clones in both dye-swapped experiments.
PlatformGPL4010
Comments
ReferenceLocke_et_al_2006
Pubmed ID16826518
Accession Number(s)nsv469874
Frequency
Sample Size265
Observed Gain2
Observed Loss3
Observed Complex0
Frequencyn/a


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